Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g02530 ATGGATCCCAATGGCGACGACTTCATAAGCAACAATACAACCGGCAACAATGAGTACTCTAACTATATGAGAAACAACTACTACGGCAACTACATGAGGAACAACACAACCGGCAACAACGACCACAATGACTACACGATCAACAACTACTACAGCAACTACATGAGGAACAACACAACTGGCAACAACGACGACTACATTAGCAACAACACAACCGGCAACAACGACCACGGTGACTACACGATCAACAACTACTACGGCAACTACATGAACAACAACACAACTGGCAATAACGACTATGATGACTACATGTGCAACTACACAACTGGAGACAACGACTATGGCAACTACATGAGCAACATCACAACCGGCAACAAAGACCACGACGACTCCACAAGCAACAACACAACCGGCGACAACGACTATGGTGAGGACACGAGCAACAACACAACCAGCAACAAAGACTATGATGACTCCATGAGCAACTACAACCACAATAAAAATACTACTACAGCAGGCGGAAATAAAGTTAAGTGCGATGAATGTGACGAAACATTTGCTAATGAAGAAGCTCAAAAAGATCATATGGAGGCAAAACATGGTGGAAAGTTCAAGTGTTTCAAGTGCGACCGTGGCTTTGCAACAAAAGAGAAAAGGAATAAGCATATGAACGGTGGAACATGCAGTAAAAAATAA 696 0.431 MDPNGDDFISNNTTGNNEYSNYMRNNYYGNYMRNNTTGNNDHNDYTINNYYSNYMRNNTTGNNDDYISNNTTGNNDHGDYTINNYYGNYMNNNTTGNNDYDDYMCNYTTGDNDYGNYMSNITTGNKDHDDSTSNNTTGDNDYGEDTSNNTTSNKDYDDSMSNYNHNKNTTTAGGNKVKCDECDETFANEEAQKDHMEAKHGGKFKCFKCDRGFATKEKRNKHMNGGTCSKK 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g02530 231 MobiDBLite consensus disorder prediction 124 170 - -
Trre9g02530 231 SUPERFAMILY beta-beta-alpha zinc fingers 178 223 IPR036236 -
Trre9g02530 231 ProSitePatterns Zinc finger C2H2 type domain signature. 179 200 IPR013087 -
Trre9g02530 231 Gene3D Classic Zinc Finger 148 226 - -
Trre9g02530 231 SMART c2h2final6 177 200 IPR013087 -
Trre9g02530 231 SMART c2h2final6 204 224 IPR013087 -
Trre9g02530 231 ProSiteProfiles Zinc finger C2H2 type domain profile. 177 205 IPR013087 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Trre9g02530 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g02530 - - psat:127123329 92.8189