Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g02483 ATGTCTCCCTTTCCCTTAACCATTACCCTCTCCTTCCTCATCCTCTTCCTACTCTTCCCCACATCCACACAAACATGCTCTTCCATCAATAACACAACTAAATTACACTCTTGCCCTCCATTCTCATCCACCCCACCTTTCCCATTCTCAACATCCCCAGGCTGTGGCCACCCTTCCTTCCAACTAACCTGCTCATCCCCCCACTCTTTCCTCACCATCAACAACCTCACTTTCTCAATCCTCTCTTTCAAACCAAACACTTCCTCAATCATCCTCTCCCCTCACAACAACAACAAAAACAACACCACTTGTCCTTCAACTTCTTCAATCCCAAACAAACCAATCAACCTCTTCAACACCCCATTCACACTCTCCGATGAAACATGTTCACGTCTCTCTTTTCTCCAACCTTGTTCACCACCAACTCACCCTAACTGTAGCCTCTGTCCTTGGCAATGCAAAATCATCAAAAACGCAACTGAAATTTTCAATGATTGTAGATCCATGCATCATTCTGTTTCAGATTCTGAACCTAGTTGTCAAAGTGATGTTCTTAGTTACCTCAATGAAATTCTCACTTTAGGTATTGAAATTCAATGGGATCAAGCTTTAACACAAGACACTTACTTCACTAATTGTAAAGATTGCATCAACAAAAACGGTTTCTGTGGTTTCAATTCTTCAGACCCGAATCAAAACTTCATTTGTTACCAATCGAAATCTACTTTTTCACCACCGTGGATTCGAAAAATGAAGCTTAACAAAATCGCGATTTTCGTTATTATTATAGCTTTCACTTCGTTGATTCTGTTTCTATCAGTTATCATTGCAATTCTCCGAGCAAGAAAGTTAAACACGACGGTGGAGGAAGATCCAACCACCGTATTCCTCCACAACCACCGCAACGCGAATCTATTTCCACCGGTTTTCACCTACGACGAATTAAACACTTCCACTAACAACTTCGATCCGAAAAGAAAAATTGGCGACGGCGGATTCGGCTCTGTTTATCTCGGAAACCTCCGTGACGGAAAACTAGCCGCCGTGAAACATCTTCACCGGCAAAATCACACAGCGGCATTCTCATCAAAATCATTCTGCAACGAGATTCTGATTCTCTCATCAATCGATCATCCAAATCTCGTTAAACTTCACGGTTACTGTAGCGATCCAAGAGGTTTGATTCTCGTTTACGATTACATTCCTAACGGAACCCTGGCGGAACATCTTCACGGTTCAAAGAGTAAACGGAACGGTTATAAGCTGACGTGGCAAACGCGGCTTGAGATTGCAATTCAAACGGCGTTAGCGATGGAGTATCTTCATTTCTCAGTTAAACCACCGATAGTTCACAGAGATATAACGTCGTCAAATATTTTTATTGAGAAAGATATGAGAATTAAAGTTGGTGATTTTGGGTTATCGAGGTTGTTAGTTTTGCAAGAAACGAATAATCAAACGACGTCGTCCAGTGGTTTTGTTTGGACTGGTCCACAAGGTACACCGGGTTATTTAGACCCGGATTACCATCGATCTTTTCGGTTAACCGAGAAGAGTGACGTGTATAGTTTTGGTGTTGTTTTGCTGGAGTTGATAACGGGGCTTAAAGCAGTTGATTATTGTAGAGATAAACGTGAGATGGCACTTGCTGACATGGTTGTTTCGAGGATTCATACGGGTCAATTGAAAGAGGTACTTGACCCGATACTTGATTTGGGTAATGACGGCGAAGCCCTTGATGCGGTGGCTGCTGTGGCGGAGTTGGCTTTTCGATGTGTTGCATCGGATACAGATGATCGACCCGATTCAAAGGAGGTTGTGGAGGAGTTGAAACGGGTTCGGTTACGGACATCAATTAATGGTGATGTGGCGAAGGTGTGA 1881 0.4296 MSPFPLTITLSFLILFLLFPTSTQTCSSINNTTKLHSCPPFSSTPPFPFSTSPGCGHPSFQLTCSSPHSFLTINNLTFSILSFKPNTSSIILSPHNNNKNNTTCPSTSSIPNKPINLFNTPFTLSDETCSRLSFLQPCSPPTHPNCSLCPWQCKIIKNATEIFNDCRSMHHSVSDSEPSCQSDVLSYLNEILTLGIEIQWDQALTQDTYFTNCKDCINKNGFCGFNSSDPNQNFICYQSKSTFSPPWIRKMKLNKIAIFVIIIAFTSLILFLSVIIAILRARKLNTTVEEDPTTVFLHNHRNANLFPPVFTYDELNTSTNNFDPKRKIGDGGFGSVYLGNLRDGKLAAVKHLHRQNHTAAFSSKSFCNEILILSSIDHPNLVKLHGYCSDPRGLILVYDYIPNGTLAEHLHGSKSKRNGYKLTWQTRLEIAIQTALAMEYLHFSVKPPIVHRDITSSNIFIEKDMRIKVGDFGLSRLLVLQETNNQTTSSSGFVWTGPQGTPGYLDPDYHRSFRLTEKSDVYSFGVVLLELITGLKAVDYCRDKREMALADMVVSRIHTGQLKEVLDPILDLGNDGEALDAVAAVAELAFRCVASDTDDRPDSKEVVEELKRVRLRTSINGDVAKV 626
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g02483 626 Gene3D Phosphorylase Kinase; domain 1 298 400 - -
Trre9g02483 626 CDD STKc_IRAK 328 612 - -
Trre9g02483 626 ProSiteProfiles Protein kinase domain profile. 322 615 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre9g02483 626 FunFam Putative serine/threonine-protein kinase At1g18390 family 298 400 - -
Trre9g02483 626 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 11 617 IPR044652 GO:0004672
Trre9g02483 626 ProSitePatterns Protein kinases ATP-binding region signature. 328 350 IPR017441 GO:0005524
Trre9g02483 626 Pfam Protein tyrosine and serine/threonine kinase 325 610 IPR001245 GO:0004672|GO:0006468
Trre9g02483 626 SUPERFAMILY Protein kinase-like (PK-like) 304 610 IPR011009 -
Trre9g02483 626 ProSitePatterns Tyrosine protein kinases specific active-site signature. 449 461 IPR008266 GO:0004672|GO:0006468
Trre9g02483 626 Gene3D Transferase(Phosphotransferase) domain 1 401 623 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g02483 Trre-Chr9 29543149 29545029 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g02483 13 625 Receptor kinase-like Gene Family AT1G69910 59.148 0.0 717
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Trre9g02483 PK_Tyr_Ser-Thr 2.4e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g02483 - - gmx:100816739 786.178