Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g02481 ATGGCTACAAATGACTTGAAGCTTTTGAGTACACCATCAAGTCCATTTGCATTGAGAGTAAAAATTGCCCTTAACATCAAAGGATTGGATTATGAAAACATTGTTGAAACCATGAATCCCAAAAGTGACTTGCTTCTTCAATCAAACCCCGTTTATAAAAAAATCCCAGTTCTAATTCATGGTGATAAACCCATTTGTGAATCTGCAATCATTGTTGAATACATTGATGAAGTTTGGAAAAATAATGGTACTCCTTCTATCCTTCCTTCAAATGCTTATGATCGCGCCATTGCGCGATTTTGGGTTGCCTACATCGATGACAAGTGGTATAATTCTTCGAAAAATCTTTTGATTGCTCAAAATGATGAGTCAAAGAAAGCATATTTTGAGGAAATGGAAGAAGTGCTTTTGAGGTTAGAAGATGTGCTCAACAAGTACAATGAAGGAAAGGAGTTTTTTGGAGGAGAGAAAATTGGATTTCTTGATATTGGTTTTGGGTGCTATTTAAGTTGGTTAAGGGTCACAGAGAAAATGATAGGAAAAAAGGTACTTGATGAAACAAAGACTCCTTCTTTGGTGAAATGGGCTGAAGCTTTTGCTGCTCATCCTGCTGTGAAGGGAAATCTACCAGAAACTGATAAGCTTTTGGAGTTTGCTAAGGGTTTGGTGCAAAGAATGGTTGCTGCTGCTCCTCCTAAGTAA 702 0.3732 MATNDLKLLSTPSSPFALRVKIALNIKGLDYENIVETMNPKSDLLLQSNPVYKKIPVLIHGDKPICESAIIVEYIDEVWKNNGTPSILPSNAYDRAIARFWVAYIDDKWYNSSKNLLIAQNDESKKAYFEEMEEVLLRLEDVLNKYNEGKEFFGGEKIGFLDIGFGCYLSWLRVTEKMIGKKVLDETKTPSLVKWAEAFAAHPAVKGNLPETDKLLEFAKGLVQRMVAAAPPK 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g02481 233 SFLD Main (cytGST) 2 228 - -
Trre9g02481 233 FunFam Glutathione S-transferase U9 88 229 - -
Trre9g02481 233 Coils Coil 129 149 - -
Trre9g02481 233 Pfam Glutathione S-transferase, N-terminal domain 6 77 IPR004045 -
Trre9g02481 233 SFLD Main.3: Omega- and Tau-like 2 228 IPR045073 -
Trre9g02481 233 Gene3D Glutaredoxin 1 87 - -
Trre9g02481 233 Pfam Glutathione S-transferase, C-terminal domain 97 203 IPR004046 -
Trre9g02481 233 Gene3D - 88 232 - -
Trre9g02481 233 SUPERFAMILY GST C-terminal domain-like 77 226 IPR036282 -
Trre9g02481 233 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 12 217 IPR045073 -
Trre9g02481 233 CDD GST_N_Tau 6 79 - -
Trre9g02481 233 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 91 222 IPR010987 -
Trre9g02481 233 FunFam Glutathione S-transferase GSTU6 1 87 - -
Trre9g02481 233 SUPERFAMILY Thioredoxin-like 5 110 IPR036249 -
Trre9g02481 233 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 4 83 IPR004045 -
Trre9g02481 233 CDD GST_C_Tau 92 222 IPR045074 GO:0004364|GO:0006749
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g02481 Trre-Chr9 29532180 29533332 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g02481 1 228 Glutathione S-transferase Gene Family AT1G10360 55.702 1.96e-87 256
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g02481 K00799 - gmx:547576 300.827