Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g02479 ATGGCTACAAATGACTTGAAGCTTTTGGGTGGCTGGTTTAGTCCATTTGCTTGTAGGGTACAAATTGCTCTTAGCATCAAAGTTTTGGATTATGAGAACATTGAAGAAAACTTGAGTTCCAAAAGTGACTTGCTTCTTCAATCCAACCCCATATACAAAAAAATCCCAGTTCTCATTCATGACGGTAAACCCATTTGTGATTCTGCAATCATAGTTCAATATATTGATGAAGTTTGGAAAAATAATGGTACTCCCTCAATCCTTCCTTCAAATGCTTATGACAAAGCCATTGCTAGATTTTGGGTTTCCTACATCGATGACAAGTTCTACAATTCCTTGAGAAATGGTTTATTTGCTCAAGATGATGAGTCAAAGAAGAAATATTTTGAGGAACTAGAAGAAGTGCTTTTGAAGTTGGAAGAAGTGTTCAACAAGTTCAGTGAAGGAAAAGACTTTTTTGGAGGAGACCAAATTGGATATATTGACATTGCTTTTGGATGCTATTTGAGTTGGTTAAGGGTCAAAGAGAAATTGACAGGAACTAAAAAGTTTGATGAAGCTAAGAATCCTGGTTTGGTGAAATGGGCTGAAGCTTTTTCAGCTCATCCTGCTGTGAAAGGAATTCTACCAGAAACTGATAAGCTTGTTGAGTATGCCATAGCTATGGCACAAGGATTGGCCGCTGCTGCCGCCGCTGCTCCTCCGAAATAA 711 0.384 MATNDLKLLGGWFSPFACRVQIALSIKVLDYENIEENLSSKSDLLLQSNPIYKKIPVLIHDGKPICDSAIIVQYIDEVWKNNGTPSILPSNAYDKAIARFWVSYIDDKFYNSLRNGLFAQDDESKKKYFEELEEVLLKLEEVFNKFSEGKDFFGGDQIGYIDIAFGCYLSWLRVKEKLTGTKKFDEAKNPGLVKWAEAFSAHPAVKGILPETDKLVEYAIAMAQGLAAAAAAAPPK 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g02479 236 FunFam Glutathione S-transferase U9 88 229 - -
Trre9g02479 236 SUPERFAMILY Thioredoxin-like 5 110 IPR036249 -
Trre9g02479 236 SFLD Main (cytGST) 2 230 - -
Trre9g02479 236 Gene3D Glutaredoxin 2 87 - -
Trre9g02479 236 Pfam Glutathione S-transferase, C-terminal domain 94 203 IPR004046 -
Trre9g02479 236 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 4 83 IPR004045 -
Trre9g02479 236 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 91 220 IPR010987 -
Trre9g02479 236 SFLD Main.3: Omega- and Tau-like 2 230 IPR045073 -
Trre9g02479 236 SUPERFAMILY GST C-terminal domain-like 77 224 IPR036282 -
Trre9g02479 236 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 9 217 IPR045073 -
Trre9g02479 236 CDD GST_N_Tau 6 79 - -
Trre9g02479 236 FunFam Glutathione S-transferase GSTU6 1 87 - -
Trre9g02479 236 Pfam Glutathione S-transferase, N-terminal domain 6 77 IPR004045 -
Trre9g02479 236 CDD GST_C_Tau 92 222 IPR045074 GO:0004364|GO:0006749
Trre9g02479 236 Gene3D - 88 231 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g02479 Trre-Chr9 29464032 29465218 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g02479 1 219 Glutathione S-transferase Gene Family AT1G10360 55.251 4.54e-83 245
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g02479 K00799 - gmx:547576 293.123