Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g02428 ATGAGTTCCTCAAACACTTCATCTTCTCCTCTTTCACCTCCACCTCCTTCACTTGAATCAAACAAAACAACCATGAATATGTACAATCATTCGTTATCCTTTTCCAATTCCTCAACATCGGCTACTAAAATTTTTGGCGATAATACTCCTACAATGAGGAAAGCGATGCGGATCCTAGAAGAACAATTTGGGCATCCCCATATATCATCATCATCATCATCAAATAATACAAATATTAATCATGTCGTCAACAACACGAAACAAATGACGGTGAATGTGCCTATTGTTTTTTATCCACCTAATATCTCTGCGGGCCCAGCATCACAATCACGAGAATTACCACCTCAGACATTCACTTTTGTTGCTACTGCTGGTGTTGATGTTGGAAATGGTAACAAGAACAAAAGGAAGAGGAAAACAAAAAATATTAATCGTGGTAGAATCTACAGCCTACCACACCCGAAATATGGACCATATACCTGTTCAAACTGTTTGCAGGTAGTGCCTACATCTCAGAAGTTTTCTAATCATGTTACGGAACATTACAAGCTTGATCATGAAGAAGAGGAAAAAAAGAGAAAGACTTCTGAAACTCAAGAGAGATCAGATCTCCAGTCTGATTAG 624 0.383 MSSSNTSSSPLSPPPPSLESNKTTMNMYNHSLSFSNSSTSATKIFGDNTPTMRKAMRILEEQFGHPHISSSSSSNNTNINHVVNNTKQMTVNVPIVFYPPNISAGPASQSRELPPQTFTFVATAGVDVGNGNKNKRKRKTKNINRGRIYSLPHPKYGPYTCSNCLQVVPTSQKFSNHVTEHYKLDHEEEEKKRKTSETQERSDLQSD 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g02428 207 ProSitePatterns Zinc finger C2H2 type domain signature. 161 181 IPR013087 -
Trre9g02428 207 MobiDBLite consensus disorder prediction 1 23 - -
Trre9g02428 207 MobiDBLite consensus disorder prediction 181 207 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g02428 Trre-Chr9 28750895 28751518 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g02428 144 193 C2H2 Transcription Factor Family AT2G15740 54.000 1.38e-11 60.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g02428 - - mtr:112419833 114.39