Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g02424 ATGAGTTCCTCAAACACTTCATCTTCTCATCTTTCACCTCCACCTCCTTCACTTGAATCAAACAAAACAACCATGAATATGTACAATCATTCGTTATCCTTTTCCAATTCCTCAACATCGGCTACTAAAATTTTTGGCGATAATACTCCTGCAATGAGGAAAGCGATGCGGATCCTAGAAGAACAATTTGGGCATCCCCATATATCATCATCATCAAATAATACAAATATTAATCATGTCGTCAACAACACAAAACAAATGACGGTGAATGTGCCTATTGTTTTTTATCCACCTAATATCTCTGCGGGCCCAGCATCACAATCACGAGAATTACCACCTCAGACATTCACTTTTGTTGCTACTGCTGGTGTTGATGTTGGAAATGGTAACAAGAACAAAAGGAAGAGGAAAACAAAAAATATTAACCGTGGTAGAATCTACAGCCTACCACACCCGAAATATGGACCATATACTTGTTTAAAGTGTTTGCAGGTAGAGCCTACATCTCATAAATTTGCTAATCATGTTACCGAACATTACAAGCTTGATCGTGAAGAAGAGGAAAAAAAGATAAAGACGTCTGAAACTCAAGAGAGATCAGATCTCCAGTCTGATCAGTCAGAAGTTGTTCCTGTCAACAACGAAAATCTTACACATATTTCTCCTTCTCCTCCTCTAAGTGGATTAAAAGTCAAAATAGAGTCTGGGGATAATTAA 717 0.378 MSSSNTSSSHLSPPPPSLESNKTTMNMYNHSLSFSNSSTSATKIFGDNTPAMRKAMRILEEQFGHPHISSSSNNTNINHVVNNTKQMTVNVPIVFYPPNISAGPASQSRELPPQTFTFVATAGVDVGNGNKNKRKRKTKNINRGRIYSLPHPKYGPYTCLKCLQVEPTSHKFANHVTEHYKLDREEEEKKIKTSETQERSDLQSDQSEVVPVNNENLTHISPSPPLSGLKVKIESGDN 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g02424 238 MobiDBLite consensus disorder prediction 203 223 - -
Trre9g02424 238 MobiDBLite consensus disorder prediction 184 238 - -
Trre9g02424 238 MobiDBLite consensus disorder prediction 1 23 - -
Trre9g02424 238 MobiDBLite consensus disorder prediction 184 202 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g02424 Trre-Chr9 28717473 28718189 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g02424 142 192 C2H2 Transcription Factor Family AT2G15740 55.769 3.37e-11 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g02424 - - mtr:112419833 123.635