Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g02416 ATGCAGCCAACATCAAATAGTCAACAGTTATCCTTTTCCAATTCCTCAACATCGGCTACTAAATTTTTTGGTGATAATACTCCTGCAATGAGGAAAGCGATGCGGATCCTAGAAGAACAATTTGGGCATCCCCACATATCATCATCATCATCAAATAATACAAATATTAATCATGTCGTCAACAACACGAAACAAATGACGGTGAATGTGCCTATTGTTTTTTATCCACCTAATATCTCTGCGGACCCAACATCACAATCACGAGAATTACCACCTCAGACATTCACTTTTGTTACTACTGCTGGTGTTGATGTTGAAAATGGTAACAAGAACAAAAGGAAGAGGAAAACAAAAAATATTAACCGTGGTAGAATATACAGCCTACCACACCCGAAATATGGACCATATACCTGTTCAAAGTGTTTGCAGGTAGTGCCTACATCTCAGAAATTTGCTAATCATGTTACCGAACATTACAAGCTTGATCGTGAAGAAGAGGAAAAAAAGAGAAAGACGTCTGAAACTCAAGAGAGATCAGATCTCCAGTCTGATCAGTCAGAAGTTGTTCCTGTCAACAACGAAAATCTTACACAGATTTCTTCTTCTCCTCCTCTAAGTGGATTAAAAGTCAAAATAGAGTCTGGGGATAATTAA 654 0.3792 MQPTSNSQQLSFSNSSTSATKFFGDNTPAMRKAMRILEEQFGHPHISSSSSNNTNINHVVNNTKQMTVNVPIVFYPPNISADPTSQSRELPPQTFTFVTTAGVDVENGNKNKRKRKTKNINRGRIYSLPHPKYGPYTCSKCLQVVPTSQKFANHVTEHYKLDREEEEKKRKTSETQERSDLQSDQSEVVPVNNENLTQISSSPPLSGLKVKIESGDN 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g02416 217 MobiDBLite consensus disorder prediction 182 207 - -
Trre9g02416 217 ProSitePatterns Zinc finger C2H2 type domain signature. 138 158 IPR013087 -
Trre9g02416 217 MobiDBLite consensus disorder prediction 159 181 - -
Trre9g02416 217 MobiDBLite consensus disorder prediction 1 25 - -
Trre9g02416 217 MobiDBLite consensus disorder prediction 1 24 - -
Trre9g02416 217 MobiDBLite consensus disorder prediction 159 217 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g02416 Trre-Chr9 28669144 28669797 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g02416 79 170 C2H2 Transcription Factor Family AT2G15740 40.217 5.42e-14 67.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g02416 - - mtr:112419833 127.487