Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g02410 ATGAGTTCCTCAAACACTTCATCTTCTCCTCTTTCACCTCCACCTCCTTCACTTGAATCAAACAAAACAACGATGAATATGTACAATCATTCGTTATCCTTTTCCAATTCCTCAACATCGGCTACTAAAATTTTTGGCGATAATACTCCTGCAATGAGGAAAGCGATTCAGATCCTAGAAGAACAATTTGGGCATCCCCACATATCATCATCATCATCAAATAATACAAATATTAATCATGTCGTCAACAACACGAAACAAATGACGGTGAATGTGCCTATTGTTTTTTATCCACCTAATATCTCTGCGGACCCAGCATCACAATCACGAGAATTATCACCTCAGACATTCACTTTTGTTGCTACTGCTGGTGTTGATGTTGGAAATGGTAACAAGAACAAAAGGAAGAGGAAAACAATAAATATTAACCATGGTAGAATCTACAGCCTACCACACCCGAAATATGGACCATATACCTGTTCAAAGTGTTTGCAGGTAGTGCCTACATCTCAGAAATTTGCTAATCATGTTACCGAACATTACAAGCTTGATCGTATTTCTCCTTCTCCTCCTCTAAGTGGATTAAAAGTCAAAATAGAGTCTGGGGATAATTAA 615 0.3789 MSSSNTSSSPLSPPPPSLESNKTTMNMYNHSLSFSNSSTSATKIFGDNTPAMRKAIQILEEQFGHPHISSSSSNNTNINHVVNNTKQMTVNVPIVFYPPNISADPASQSRELSPQTFTFVATAGVDVGNGNKNKRKRKTININHGRIYSLPHPKYGPYTCSKCLQVVPTSQKFANHVTEHYKLDRISPSPPLSGLKVKIESGDN 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g02410 204 ProSitePatterns Zinc finger C2H2 type domain signature. 160 180 IPR013087 -
Trre9g02410 204 MobiDBLite consensus disorder prediction 1 23 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g02410 Trre-Chr9 28645030 28645749 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g02410 145 182 C2H2 Transcription Factor Family AT2G18490 65.789 1.31e-11 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g02410 - - mtr:112419833 106.686