Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g02409 ATGAGTTCCTCAAACACTTCATCTTCTCCTCTTTCACCACCACCTCCTTCACTTGAATCAAACAAAACAACCATGAATATGTACAATCATTCGTTATCCTTTTCCAATTACTCAACATCGGCTACTAAAATTTTTGGCGATAATACTCCTGCAATGAGGAAAGCGATGCAGATCCTAGAAGAACAATTTGGGCATCCCCACATATCATCATCATCATCATCAAATAATACAAATATTAATCATGTCGTCAACAACACGAAACAAATGACGGTGAATGTGCCTATTGTTTTTTATCCACCTAATATCTCTGTGGACCCAGCATCACAATCACGAGAATTACCACCTCAGACATTCACTTTTGTTGCTACTGCTGGTGTTGATGTTGGAAATGGTAACAAGAACAAAAGGAAAAGGAAAACAATAAATATTAACCGTGGTAGAATCTACAGCCTACCACACCCGAAATATGGACCATATACCTGTTCAAAGTGTTTGCAGGTAGTGCCTACATCTCAGAAATTTGCTAATCATGTTACCGAACATTACAAGCTTGATCGTGTAGAAGAGGAAAAAAAGAGAAAGACGTCTAAAACTCAAGAGAGATCAGATCTCCAGTCTGATCAGTTAGAAGTTGTTCCTGTCAACAACGAAAATCTTACACAGATTTCTCCTTCTCCTCCTCTAAGTGGATTAAAAGTCAAAATAGAGTCTGGGGATAATTAA 723 0.379 MSSSNTSSSPLSPPPPSLESNKTTMNMYNHSLSFSNYSTSATKIFGDNTPAMRKAMQILEEQFGHPHISSSSSSNNTNINHVVNNTKQMTVNVPIVFYPPNISVDPASQSRELPPQTFTFVATAGVDVGNGNKNKRKRKTININRGRIYSLPHPKYGPYTCSKCLQVVPTSQKFANHVTEHYKLDRVEEEKKRKTSKTQERSDLQSDQLEVVPVNNENLTQISPSPPLSGLKVKIESGDN 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g02409 240 MobiDBLite consensus disorder prediction 1 23 - -
Trre9g02409 240 MobiDBLite consensus disorder prediction 186 240 - -
Trre9g02409 240 ProSitePatterns Zinc finger C2H2 type domain signature. 161 181 IPR013087 -
Trre9g02409 240 Coils Coil 187 207 - -
Trre9g02409 240 MobiDBLite consensus disorder prediction 205 227 - -
Trre9g02409 240 MobiDBLite consensus disorder prediction 186 204 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g02409 Trre-Chr9 28643037 28643759 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g02409 144 201 C2H2 Transcription Factor Family AT2G15740 51.724 2.12e-13 66.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g02409 - - mtr:112419833 133.65