Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g02408 ATGAGTTCCTCAAAAACTTCATCTTCTCCTCTTTCACCTCCACCTCCTTCACTTGAATCAAACAAAACAACCATGAATATGTACAATCATTCGTTATCCTTTTCCAATTCCTCAACATCGGCTACTAAAATTTTTGGCGATAATACTCCTACAATGAGGAAAGCGATGCGGATCCTAGAAGCACAATTTGGGCATCCCCACATATCGTCATCATCATCAAATAATACAAATATGAATCATGTCGTCAACAACACGAAACAAATGACGGTAAATGTACCTATTCTTCTTTATCCACCTAATATCTCTGCGGGCCCAGCATCACAATCACGAGAATTACCACCTCAGACATTCACTTTTGTTGCTACTGCCGGTGTTGATGTTGAAAATGGTAACAAGAACAAAAGGAAGAGGAAAACAAAAAATAATAATCGTGGTAGAATCTACAGCCTACCACACCCGAAATATGGACCATATACCTGTTCAAAGTGTTTGCAGGTAGTGCCTACATCTCAGAAGTTTGCTAATCATGTTACGGAACATTACAAGCTTAATCGTGAAGAAGAGGAAAAAAAGAGAAAGACGTCTGAAACTCAAGAGAGATCAGATCTCCAGTCTGATCAGTCAGAAGTTTTCCTGTCAACAACGAAAATCTTACACAAATTTCTCCTTCTCCTCCTCTAA 681 0.3891 MSSSKTSSSPLSPPPPSLESNKTTMNMYNHSLSFSNSSTSATKIFGDNTPTMRKAMRILEAQFGHPHISSSSSNNTNMNHVVNNTKQMTVNVPILLYPPNISAGPASQSRELPPQTFTFVATAGVDVENGNKNKRKRKTKNNNRGRIYSLPHPKYGPYTCSKCLQVVPTSQKFANHVTEHYKLNREEEEKKRKTSETQERSDLQSDQSEVFLSTTKILHKFLLLLL 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g02408 226 MobiDBLite consensus disorder prediction 178 203 - -
Trre9g02408 226 ProSitePatterns Zinc finger C2H2 type domain signature. 160 180 IPR013087 -
Trre9g02408 226 MobiDBLite consensus disorder prediction 128 150 - -
Trre9g02408 226 MobiDBLite consensus disorder prediction 178 206 - -
Trre9g02408 226 MobiDBLite consensus disorder prediction 1 23 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g02408 Trre-Chr9 28637128 28637808 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g02408 141 192 C2H2 Transcription Factor Family AT2G15740 55.769 6.59e-13 65.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g02408 - - mtr:112419833 116.701