Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g02376 ATGCTTTGGAATTTCTCAAAGAAGATTGATGCTGCGGAATTAATAAAAAGATTGAAGGAAATATTTGAAGATCATAAAGATTTGCTATCGAAATTAAACAACTTCTTGCCAATTGAATGTGAAATCGAACTTCCATTGGATGGTGAACAATCTAGCCCAAAGAAGCATGTTAAAAAGGAAGATGCTATAAATTTTTTGAAAAAGATAAAGGTTTTTAGTGTTCTAAAGTTTGATGGATTCTCATGA 246 0.3049 MLWNFSKKIDAAELIKRLKEIFEDHKDLLSKLNNFLPIECEIELPLDGEQSSPKKHVKKEDAINFLKKIKVFSVLKFDGFS 81
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g02376 81 ProSiteProfiles PAH domain profile. 1 39 IPR003822 GO:0006355
Trre9g02376 81 Gene3D Paired amphipathic helix 1 37 IPR036600 GO:0006355
Trre9g02376 81 PANTHER SIN3B-RELATED 5 70 IPR039774 GO:0003714
Trre9g02376 81 SUPERFAMILY PAH2 domain 7 37 IPR036600 GO:0006355
Trre9g02376 81 Pfam Paired amphipathic helix repeat 3 36 IPR003822 GO:0006355
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Trre9g02376 PAH 5.5e-05 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g02376 - K02945 tpra:123904388 95.9005