Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g02373 ATGAAGAAAATATTAGAAGGCCATAAAGATTTGATATTGAAATTTAACATAATCCTGCCAGATCCATATAAAATAAAGGATGGAAATACTAGCCTAAAGAAGCGTCCTAATTTGGAAGATGCTAAAAGTTTTTTGAGAAAGATAAGGGCTCAATTTCAAGGGGTCGATGATCACATTTACAAATCATTGATTGCCATATTGTATAGGTATTATAGGAAAGTTGAGTCTTTCGATGCGGTTTACCAAGAGGTTACTACACTTCTCAAAGACCACCCTGATCTTCTTAATGAATTTATTCATTTTCTTCCAAATGGTATTGCTTCACAAAAGGTTATTGCTTCTCGTTATGTTGCTGCTTGCAATCGTGTGCGTCGAGATTCAACAATGTGGCTAATAAATTAG 402 0.3433 MKKILEGHKDLILKFNIILPDPYKIKDGNTSLKKRPNLEDAKSFLRKIRAQFQGVDDHIYKSLIAILYRYYRKVESFDAVYQEVTTLLKDHPDLLNEFIHFLPNGIASQKVIASRYVAACNRVRRDSTMWLIN 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g02373 133 ProSiteProfiles PAH domain profile. 34 105 IPR003822 GO:0006355
Trre9g02373 133 Gene3D Paired amphipathic helix 40 103 IPR036600 GO:0006355
Trre9g02373 133 PANTHER SIN3B-RELATED 2 107 IPR039774 GO:0003714
Trre9g02373 133 SUPERFAMILY PAH2 domain 30 104 IPR036600 GO:0006355
Trre9g02373 133 Pfam Paired amphipathic helix repeat 58 102 IPR003822 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g02373 Trre-Chr9 27862044 27862828 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Trre9g02373 PAH 1.3e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g02373 K11644 - tpra:123904383 168.703