Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g02351 ATGGCTTTCAACATGATGTTTCTAAGTCTTGTTCTTGTCTTACAAATTTTTCTAATACCAACTTTCTATTGTCAAACCAATTCACCTCAAAACCAAAACATTGAAACTTTGTATCCTATTGAATCTCAAGAACAACCAAAACCAACACAACCTTCTAAGCCACAAGAATCATCACCACCACCATCATCATCATCACAAGCACCAATAGCATCACCATCATCCACAAAATCTTCTTCTAATAGTAAGATAGTAACTGCTGTAGCTGCAACTGCAACAGGAACATTAATTCTTTCTGCTCTAATTTTCTTCTTTGTTATGAAGTGCTTTAGAGCAAAAAGAAGAAATGTGATAGTAAACAATAGCAATAACAATAACAACACTTCTTCTTTAGATCATAGAAATGTTGTGCCTCAAGTGAAAGTGATTGAGAAAATGGAAGGTAAAATCAAAGGACTTATTGTTGATGAAGATGGTTTAGATGTTGTTTATTGGAGAAAACTTGAAGATCAAAACACTAATAAGGATTTGCATAAGGGTGTTGTTTTGAATAGTCCTAAAAACAAACATTATTATGATCATCATGAAGAAAATCAAGGGAAAAATTTAGAGACTAATAATCAAGAAATTCATTTGCTTAGAGGAAAATCTTCAACCTCACATATGAATATATTTCCACAAGAATCATCATATACAATTATGAAAATTACACCTCCTGCACCTCCTCCTATTATTCCTACTCAACCATTTTCTTTAAACCTTCTTCCTTCATCACCAAAACGTCTAAAACCACCTTCCACTTCTTCTTTCTCATCAATTCCAAAACATTCAAATCCTTTTGCATCATCAGTTCCGAATACGACAAATGATGCAACACCAATAATATCTGATGATGGAATGAGTCAAAAACCGACGTCACCTCCTCCTCCTCCTCCTCCACCTATACCTGATAGAAAAAGCTCAGTACCGATGCCGGCGCCTCCTCCTCCTCCACCTCCACCAATTCTAAATAAAAAGAGTTCTACAACACCGCCACCACCACCACCTCCTCCTACAGTAACTACTGCAAAGAGTCCTGCACCACCACCCCCTCCGAAGATAGGTGGATTGAAATTGAAGTCGTCATCAAAACCACCACCTATCCCTATTGAAACATCTTCAAGTGAGGTAAAAATGAAACCATTGCATTGGGATAAGGTGAATACTAATCTTGATCACTCTATGGTATGGGACAAAATCGACCGCGGTTCATTCAGAGTTGATGATGATCTCATGGAAGCTCTCTTCGGGATTGTTGCAACCAAATCAATCGGTAACACTTCTAAAGGAAAGGAATCAACAAGTCCAAACAGGGATGCTTCGACAAATGCTTTCATTCTTGACCCTAGGAAATCACAAAACACTGCTATAGTTTTGAAATCTCTTGCAATCTCACGAAAAGAAATCATCGAAGCACTCATTGATGGTCAAGGCCTCAATGCAGATACAATTGAAAAGCTTTCAAGAATAGCTCCAACAGAAGAAGAACAATCCCAAATACTTGAATATGAAGGAGACACAACAAAACTTGCAGCAGCTGAATCTTTCTTGTACCACATCCTCAAAGCTGTTCCTTCGGCATTTAAGCGCTTGAATGCAATTCTATTCAGATTGAATTATGACTCGGAGATCGTAGAAATCAAGGAGTTTCTACAGACCCTTGAGCTCGCGTGTAAGGAGCTTCGAAACCAAGGAGTTTTTGTAAAGCTTCTTGAAGCAGTTCTTAAGGCCGGAAACCGTATGAACGCAGGTACTAATAGAGGTAATGCTCAAGCTTTCAACTTGGTTTCTCTAAGGAAACTCTCTGATGTTAAGAGCGTTGATGGAAAAACCACATTGCTTCACTTTGTGGTTGAAGAAGTTGTCCGTTCCGAAGGAAAACGCGCGGTTCTTAACCGCAATCACAGTTTGAGTCGTAGTTTCAGTAGGAGCAATAGCAGCAGTAGCATTGGAGACTCTAACAATTCTGCTACTTCAAAGGAACAAAAACAAAGAGAATATACAACACTAGGATTACCAATTGTAGGAGGGGTCAGTGCAGAGTTTTCCAATGTAAAGAAAGTTGCTCAAACAGATTACAATAGTTTTGTTGGTTCTATCTCAGCACTCTTGGCAAGGATAGTTGAAATTCGACAACTTGTTTCGCAGTGTGGAAATAATGATAAAGAAGGAAAGTTTGTCAGAGAGATGAATCATTTTCTTGAAAATGCTGAGAAGGAATTGCAATTGGTGAGTGAAGAACAAACAAGGGTAATGCAGCTTGTTAAGAGAACAACAGATTATTATCAAGGTGGAGCTTCAAAAGACAGTGCAGGAGAACAGGCTCTTTATCTATTTGTTATAGTCAAGGATTTTCTTGGAATGGTTGATCAAGCCTGCATAGACATCACTCGAAATTTGCAGAAAAAGAAGACACCTAAGGCAAAGTCTTAA 2469 0.3823 MAFNMMFLSLVLVLQIFLIPTFYCQTNSPQNQNIETLYPIESQEQPKPTQPSKPQESSPPPSSSSQAPIASPSSTKSSSNSKIVTAVAATATGTLILSALIFFFVMKCFRAKRRNVIVNNSNNNNNTSSLDHRNVVPQVKVIEKMEGKIKGLIVDEDGLDVVYWRKLEDQNTNKDLHKGVVLNSPKNKHYYDHHEENQGKNLETNNQEIHLLRGKSSTSHMNIFPQESSYTIMKITPPAPPPIIPTQPFSLNLLPSSPKRLKPPSTSSFSSIPKHSNPFASSVPNTTNDATPIISDDGMSQKPTSPPPPPPPPIPDRKSSVPMPAPPPPPPPPILNKKSSTTPPPPPPPPTVTTAKSPAPPPPPKIGGLKLKSSSKPPPIPIETSSSEVKMKPLHWDKVNTNLDHSMVWDKIDRGSFRVDDDLMEALFGIVATKSIGNTSKGKESTSPNRDASTNAFILDPRKSQNTAIVLKSLAISRKEIIEALIDGQGLNADTIEKLSRIAPTEEEQSQILEYEGDTTKLAAAESFLYHILKAVPSAFKRLNAILFRLNYDSEIVEIKEFLQTLELACKELRNQGVFVKLLEAVLKAGNRMNAGTNRGNAQAFNLVSLRKLSDVKSVDGKTTLLHFVVEEVVRSEGKRAVLNRNHSLSRSFSRSNSSSSIGDSNNSATSKEQKQREYTTLGLPIVGGVSAEFSNVKKVAQTDYNSFVGSISALLARIVEIRQLVSQCGNNDKEGKFVREMNHFLENAEKELQLVSEEQTRVMQLVKRTTDYYQGGASKDSAGEQALYLFVIVKDFLGMVDQACIDITRNLQKKKTPKAKS 822
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g02351 822 MobiDBLite consensus disorder prediction 302 367 - -
Trre9g02351 822 Coils Coil 556 576 - -
Trre9g02351 822 SMART it6_source 381 816 IPR015425 -
Trre9g02351 822 Coils Coil 739 766 - -
Trre9g02351 822 MobiDBLite consensus disorder prediction 238 388 - -
Trre9g02351 822 Gene3D Formin, FH2 domain 401 822 IPR042201 -
Trre9g02351 822 ProSiteProfiles Formin homology-2 (FH2) domain profile. 381 822 IPR015425 -
Trre9g02351 822 MobiDBLite consensus disorder prediction 42 78 - -
Trre9g02351 822 PANTHER FORMIN-RELATED 14 812 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Trre9g02351 822 Pfam Formin Homology 2 Domain 386 801 IPR015425 -
Trre9g02351 822 MobiDBLite consensus disorder prediction 59 78 - -
Trre9g02351 822 SUPERFAMILY Formin homology 2 domain (FH2 domain) 394 817 - -
Trre9g02351 822 MobiDBLite consensus disorder prediction 651 676 - -
Trre9g02351 822 MobiDBLite consensus disorder prediction 249 301 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g02351 Trre-Chr9 27048863 27051541 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g02351 365 817 FH2 protein (formin) Gene Family AT1G70140 58.824 6.33e-180 534
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g02351 - - gmx:100780368 838.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre9g02351 9 27048863 27051541 Trre9g02351 9 27048863 27051541 ECH