Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g02318 ATGCCAACCCTTATTCAATTCTTGATATCAGTTTCGATACTGTTGCTTTTTGTGCAAGTTTCATCCCAAGTTAACCAGTTCTTATATGAAGGATTCAAGGATATTGGTCCCAACAATCTAACCTTGGAAGGATTTGCAAAGATAGAGAAAAATGGGATAATAAGATTAACAAATCATACAAACAATATAACAGGTCATGCTTTTTATCCATTACCTTTTCAACTAAAGAACTCAACAACTGGTAAAGCTTTCTCTTTTTCTTCATCTTTTGTTCTTGCTGTTGTCCCTCAGTATCCTAACATAGGTGGTCATGGCATGGCTTTCACAATAGCAACTACTAAGGATCTTAAAGGTTCACCTATTCAATATCTTGGTCTATTCAATTCAAGTAATGTTGGTAATTTCTCTAACCATCTTTTTGCTGTTGAGTTTGACACTGTCCAAGACTTTGGATTTGATGATATCAATGATAACCATGTTGGAATAGACATCAATGGTTTGAAATCCAATGCATCTGTTATTGCTGGCTATTACACTGACAATGATTCAACCAAACAATATTTTAATATCAAAAGTGGTAAACCAATTCTAGCTTGGGTTGATTATGATTCTTCATTGAATCTTGTTAGTGTTACACTTTCTTCAACTTCAACCAAACCTAAAAAACCAACTTTGTTCTTTCATGTGGATTTATCACATATTTTTCATGATACTATGTATGTTGGATTCTCTGCATCAACTGGTTTGCAGCTTGCTAGCTCTCATTACATCTTGGGTTGGAGTTTTAGAATCAATGGACTAGCACCATCACTTGATTTGTCTTCACTTCCACAACTTACACAACCAAAGAAGAAAAACACTTCTTTGATAACCCGTGTTTCGGTCACGGTTTCGGTTGTTGTATTGTGTTTTATAGCAATTGGTATTTACATTTTCAGAAAAATCAAGAATGCTGATGTAATAGAACCATGGGAGCTTGAAGTTGGGCCACATAGATACTCCTATCAAGAGCTAAACAAAGCTACAAAAGGTTTCAAAGAAAAAGAGTTACTTGGGCAGGGTGGTTTTGGCAGAGTTTACAAAGGAACATTGCCAAATTCAGATATTCAAGTAGCTGTTAAGAGAGTGTCACATGAATCAAAACAAGGGCTAAGAGAATTTGTCTCGGAAATCGCCAGCATAGGTCGGCTTCGCCATAGGAACTTGGTTCAGTTACTTGGATGGTGTCGCCGCAAAGGCGACCTCTTACTAGTGTTATGTGAACATGGTGATAATCCAGGTACCACAAGAGTGGTAGGAACCTTAGGCTATTTGGCACCAGAGTTACTTAGAACAGGAAAAACATCTACAAGTTCTGATGGTTTTGCATTTGGTGCATTTCTTCTTGAGGTTGCTTGTGGGAGAAGGCCTATTGAGCCTAAGGCATTACAAGAAGAGTTAGTGTTAGTGGATTGGGTGTGGGAAAGGTACAAAGAAGGAAGAATACTTGAAGTAGTGGATCCTAAATTGAATGGAAATTTTGATGAAAATGAGGTAGTGATGGTGTTGAAATTGGGATTGATATGTTCAAATGATGTTCCTATTATAAGGCCTAGCATGAGACATGTAATGAGGATTTTGGATGGAGAAGTTGAATTGCCTATTGACTTGAGAAAGCCAGGAGTTATTGATCCACAAGAAGGGTTTGATGAATTTTTGAACTCTCTTACATATTCATCGATTGATATCTTGAGTTCAAGCTCTTATCTTGAAAATAGATACACTAATACTTGTAATACCTCTTTTGAAAATTCACCTCAATCACTTCTCAATCCTAGAGAGTAA 1824 0.3668 MPTLIQFLISVSILLLFVQVSSQVNQFLYEGFKDIGPNNLTLEGFAKIEKNGIIRLTNHTNNITGHAFYPLPFQLKNSTTGKAFSFSSSFVLAVVPQYPNIGGHGMAFTIATTKDLKGSPIQYLGLFNSSNVGNFSNHLFAVEFDTVQDFGFDDINDNHVGIDINGLKSNASVIAGYYTDNDSTKQYFNIKSGKPILAWVDYDSSLNLVSVTLSSTSTKPKKPTLFFHVDLSHIFHDTMYVGFSASTGLQLASSHYILGWSFRINGLAPSLDLSSLPQLTQPKKKNTSLITRVSVTVSVVVLCFIAIGIYIFRKIKNADVIEPWELEVGPHRYSYQELNKATKGFKEKELLGQGGFGRVYKGTLPNSDIQVAVKRVSHESKQGLREFVSEIASIGRLRHRNLVQLLGWCRRKGDLLLVLCEHGDNPGTTRVVGTLGYLAPELLRTGKTSTSSDGFAFGAFLLEVACGRRPIEPKALQEELVLVDWVWERYKEGRILEVVDPKLNGNFDENEVVMVLKLGLICSNDVPIIRPSMRHVMRILDGEVELPIDLRKPGVIDPQEGFDEFLNSLTYSSIDILSSSSYLENRYTNTCNTSFENSPQSLLNPRE 607
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g02318 607 Gene3D - 23 270 - -
Trre9g02318 607 SUPERFAMILY Concanavalin A-like lectins/glucanases 25 283 IPR013320 -
Trre9g02318 607 FunFam Lectin-domain containing receptor kinase A4.3 330 420 - -
Trre9g02318 607 Gene3D Transferase(Phosphotransferase) domain 1 417 546 - -
Trre9g02318 607 FunFam L-type lectin-domain containing receptor kinase S.4 23 270 - -
Trre9g02318 607 CDD lectin_legume_LecRK_Arcelin_ConA 26 266 IPR001220 GO:0030246
Trre9g02318 607 PANTHER - 43 418 - -
Trre9g02318 607 Pfam Legume lectin domain 26 276 IPR001220 GO:0030246
Trre9g02318 607 Pfam Protein tyrosine and serine/threonine kinase 347 422 IPR001245 GO:0004672|GO:0006468
Trre9g02318 607 SUPERFAMILY Protein kinase-like (PK-like) 327 562 IPR011009 -
Trre9g02318 607 ProSitePatterns Protein kinases ATP-binding region signature. 351 374 IPR017441 GO:0005524
Trre9g02318 607 ProSiteProfiles Protein kinase domain profile. 345 607 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre9g02318 607 Gene3D Phosphorylase Kinase; domain 1 330 416 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g02318 Trre-Chr9 26422742 26424790 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g02318 411 606 Receptor kinase-like Gene Family AT3G55550 49.749 1.37e-51 187
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Trre9g02318 Lectin_legB 2.1e-72 CL0004
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g02318 - - gmx:100784346 574.704