Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g02317 ATGCCAACCCTTATTCAATTCTTGATATCAGTTTCGATACTGTTGCTTTTTGTGCAAGTTTCATCCCAAGTTAACCAGTTCTTATATGAAGGATTCAAGGATATTGGTCCCAACAATCTAACCTTGGAAGGATTTGCAAAGATAGAGAAAAATGGGATAATAAGATTAACAAATCATACAAACAATATAACAGGTCATGCTTTTTATCCATTACCTTTTCAACTAAAGAACTCAACAACTGGTAAAGCTTTCTCTTTTTCTTCATCTTTTGTTCTTGCTGTTGTCCCTCAGTATCCTAACATAGGTGGTCATGGCATGGCTTTCACAATAGCAACTACTAAGGATCTTAAAGGTTCACCTATTCAATATCTTGGTCTATTCAATTCAAGTAATGTTGGTAATTTCTCTAACCATCTTTTTGCTGTTGAGTTTGACACTGTCCAAGACTTTGGATTTGATGATATCAATGATAACCATGTTGGAATAGACATCAATGGTTTGAAATCCAATGCATCTGTTATTGCTGGCTATTACACTGACAATGATTCAACCAAACAATATTTTAATATCAAAAGTGGTAAACCAATTCTAGCTTGGGTTGATTATGATTCTTCATTGAATCTTGTTAGTGTTACACTTTCTTCAACTTCAACCAAACCTAAAAAACCAACTTTGTTCTTTCATGTGGATTTATCACATATTTTTCATGATACTATGTATGTTGGATTCTCTGCATCAACTGGTTTGCAGCTTGCTAGCTCTCATTACATCTTGGGTTGGAGTTTTAGAATCAATGGACTAGCACCATCACTTGATTTGTCTTCACTTCCACAACTTACACAACCAAAGAAGAAAAACACTTCTTTGATAACCCGTGTTTCGGTCACGGTTTCGGTTGTTGTATTGTGTTTTATAGCAATTGGTATTTACATTTTCAGAAAAATCAAGAATGCTGATGTAATAGAACCATGGGAGCTTGAAGTTGGGCCACATAGATACTCCTATCAAGAGCTAAACAAAGCTACAAAAGGTTTCAAAGAAAAAGAGTTACTTGGGCAGGGTGGTTTTGGCAGAGTTTACAAAGGAACATTGCCAAATTCAGATATTCAAGTAGCTGTTAAGAGAGTGTCACATGAATCAAAACAAGGGCTAAGAGAATTTGTCTCGGAAATCGCCAGCATAGGTCGGCTTCGCCATAGGAACTTGGTTCAGTTACTTGGATGGTGTCGCCGCAAAGGCGACCTCTTACTAGTGTATGACTTCATGGCTAATGGAAGCTTAGATAAGTACTTATTTGAAAAGACAGAAATTGTGTTAACTTGGGAACAAAGGTTTAAGATAATAAAGGATGTTGCTTCAGCTCTTTTGTATCTACATGAAGGCTATGAGCAAGTGGTAATACATAGAGATGTTAAGGCTAGCAATGTTCTTTTAGATTTTGAACTTAATGGAAGATTAGGTGATTTTGGTTTGGCAAGGTTATGTGAACATGGTGATAATCCAGGTACCACAAGAGTGGTAGGAACCTTAGGCTATTTGGCACCAGAGTTACTTAGAACAGGAAAAACATCTACAAGTTCTGATGGTTTTGCATTTGGTGCATTTCTTCTTGAGGTTGCTTGTGGGAGAAGGCCTATTGAGCCTAAGGCATTACAAGAAGAGTTAGTGTTAGTGGATTGGGTGTGGGAAAGGTACAAAGAAGGAAGAATACTTGAAGTAGTGGATCCTAAATTGAATGGAAATTTTGATGAAAATGAGGTAGTGATGGTGTTGAAATTGGGATTGATATGTTCAAATGATGTTCCTATTATAAGGCCTAGCATGAGACATGTAATGAGGATTTTGGATGGAGAAGTTGAATTGCCTATTGACTTGAGAAAGCCAGGAGTTATTGATCCACAAGAAGGGTTTGATGAATTTTTGAACTCTCTTACATATTCATCGATTGATATCTTGAGTTCAAGCTCTTATCTTGAAAATAGATACACTAATACTTGTAATACCTCTTTTGAAAATTCACCTCAATCACTTCTCAATCCTAGAGAGTAA 2049 0.3636 MPTLIQFLISVSILLLFVQVSSQVNQFLYEGFKDIGPNNLTLEGFAKIEKNGIIRLTNHTNNITGHAFYPLPFQLKNSTTGKAFSFSSSFVLAVVPQYPNIGGHGMAFTIATTKDLKGSPIQYLGLFNSSNVGNFSNHLFAVEFDTVQDFGFDDINDNHVGIDINGLKSNASVIAGYYTDNDSTKQYFNIKSGKPILAWVDYDSSLNLVSVTLSSTSTKPKKPTLFFHVDLSHIFHDTMYVGFSASTGLQLASSHYILGWSFRINGLAPSLDLSSLPQLTQPKKKNTSLITRVSVTVSVVVLCFIAIGIYIFRKIKNADVIEPWELEVGPHRYSYQELNKATKGFKEKELLGQGGFGRVYKGTLPNSDIQVAVKRVSHESKQGLREFVSEIASIGRLRHRNLVQLLGWCRRKGDLLLVYDFMANGSLDKYLFEKTEIVLTWEQRFKIIKDVASALLYLHEGYEQVVIHRDVKASNVLLDFELNGRLGDFGLARLCEHGDNPGTTRVVGTLGYLAPELLRTGKTSTSSDGFAFGAFLLEVACGRRPIEPKALQEELVLVDWVWERYKEGRILEVVDPKLNGNFDENEVVMVLKLGLICSNDVPIIRPSMRHVMRILDGEVELPIDLRKPGVIDPQEGFDEFLNSLTYSSIDILSSSSYLENRYTNTCNTSFENSPQSLLNPRE 682
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g02317 682 SMART serkin_6 345 658 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre9g02317 682 CDD lectin_legume_LecRK_Arcelin_ConA 26 266 IPR001220 GO:0030246
Trre9g02317 682 CDD STKc_IRAK 351 617 - -
Trre9g02317 682 Pfam Protein kinase domain 345 548 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre9g02317 682 SUPERFAMILY Concanavalin A-like lectins/glucanases 25 283 IPR013320 -
Trre9g02317 682 Gene3D - 23 270 - -
Trre9g02317 682 ProSiteProfiles Protein kinase domain profile. 345 621 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre9g02317 682 ProSitePatterns Protein kinases ATP-binding region signature. 351 374 IPR017441 GO:0005524
Trre9g02317 682 SUPERFAMILY Protein kinase-like (PK-like) 327 636 IPR011009 -
Trre9g02317 682 FunFam L-type lectin-domain containing receptor kinase S.4 422 627 - -
Trre9g02317 682 Gene3D Transferase(Phosphotransferase) domain 1 422 626 - -
Trre9g02317 682 Gene3D Phosphorylase Kinase; domain 1 330 421 - -
Trre9g02317 682 Pfam Legume lectin domain 26 276 IPR001220 GO:0030246
Trre9g02317 682 PANTHER - 43 622 - -
Trre9g02317 682 FunFam Lectin-domain containing receptor kinase A4.3 330 421 - -
Trre9g02317 682 FunFam L-type lectin-domain containing receptor kinase S.4 23 270 - -
Trre9g02317 682 ProSitePatterns Serine/Threonine protein kinases active-site signature. 466 478 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g02317 Trre-Chr9 26422742 26424790 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g02317 20 681 Receptor kinase-like Gene Family AT3G55550 57.377 0.0 742
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Trre9g02317 Pkinase 1.2e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g02317 - - gmx:100784346 966.837