Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g02291 ATGATGAGTGAAGGAGCAAGTGTAACAGCAGCAATGGTTGCAACTCAATTCTTGGAAATGGGCAATAACACACTAATGAAATCAGCCACTAATGATGGAATGAGTATTTTTATTTTCACTTTTTACTCAAATCTTTTGGCTCTCTGTTTCCTTCTACCATCCACACTTTTCTACAATAGGAAAAGAGCTCCTCCTCCAATTTCAACTTCAATTTTCTTCAGAATGTTACTTCTTAGCTGTCTAAGTACTACAGTGCAAACTTTGATGTATACTGGAATTGGATATAGCTCTCCAACGTTGTCATCTGCTATGGTTGATCTTGTGCCTGCTTTCACATTCATACTTGCTGTAATTTCAAGGATGGAAAATCTAAACCTGAAACAACATAGCAGCCAAGCTAAAATCATTGGTACAGTGGTCTCCATTGTAGGGGCATTAATCGTAACATTGTATAAAGGGCTACCAGTGATTAGTAATTCTTTTCCAAATATAGAAATGGGAGCAAGTGGAATTTACCTGGCAGGAACATCTAAATGGATAATTGGTGCTTTTCTTCTTGCAACTGCTAGCTTTTGCCTTTCTATTTTATATATTGTCCAGACCTGGATTATCAGGGAATATCCGGAAGAGTTGGTGGTAACAACTATTACTTGTGGCTTGGTGGTAATCTTATCTGCAATTGTAGCTCTCTTTGCTGAGGGAAATTCAAATGTTTGGGTACTCAGACATGATAAGGAGTTGGTAGCTGTGTGTTTTTCGGCAATTTTTGTGGTATCTATGAGAAGTGTTATATGCACATGGGCATTCCGTAAGAAAGGACCCATATATGTAGCTATGTTCAATCCATTAGGAATGGTCATTGCACTTGGCATGGGAGTAATATTTTTGGGGGACAATCTTTATCTTGGAAGCATGATTGGAGCTGCTATTATAGCCATTGGATTTTATGCTGTGATGTGGGCACAAGCTCAAGAAGAACACAAAACAAGTGAAAATAGTTTTCTCCCATCTTCTTCAGCCCCTCTGTTGTCAACCAAAAACATAGATATCTAG 1053 0.3827 MMSEGASVTAAMVATQFLEMGNNTLMKSATNDGMSIFIFTFYSNLLALCFLLPSTLFYNRKRAPPPISTSIFFRMLLLSCLSTTVQTLMYTGIGYSSPTLSSAMVDLVPAFTFILAVISRMENLNLKQHSSQAKIIGTVVSIVGALIVTLYKGLPVISNSFPNIEMGASGIYLAGTSKWIIGAFLLATASFCLSILYIVQTWIIREYPEELVVTTITCGLVVILSAIVALFAEGNSNVWVLRHDKELVAVCFSAIFVVSMRSVICTWAFRKKGPIYVAMFNPLGMVIALGMGVIFLGDNLYLGSMIGAAIIAIGFYAVMWAQAQEEHKTSENSFLPSSSAPLLSTKNIDI 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g02291 350 SUPERFAMILY Multidrug resistance efflux transporter EmrE 239 323 - -
Trre9g02291 350 PANTHER WAT1-RELATED PROTEIN 8 329 IPR030184 GO:0016020|GO:0022857
Trre9g02291 350 Pfam EamA-like transporter family 181 319 IPR000620 GO:0016020
Trre9g02291 350 Pfam EamA-like transporter family 28 149 IPR000620 GO:0016020
Trre9g02291 350 SUPERFAMILY Multidrug resistance efflux transporter EmrE 44 152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g02291 Trre-Chr9 25974817 25984744 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g02291 11 349 Nodulin-like Gene Family AT3G28050 44.633 1.51e-86 264
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g02291 - - gmx:100793168 459.529