Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g02286 ATGGATTTTTTTATTTCATTAGCTGGTAAAGTTGCTGAATATATGGTTGAACCTATTGGTCGTCAATTTGGTTACATACTCTACTACAAGGGAAACCTTGCAAAGATGAAAACTGATGTCCAAAATCTAGAGGGAATAAAAGATATTGTGCAACACACTGTTGACGAGGCTAGAAGGACCGGAGAAGAGATTGAAAATATTGTCAAAAACTGGTTGATCACAGTGGACAATACTAATGCTGAGGCAAACAAACTTATTCACACCGAAGACCATGCAAAAGCTCAATGTTCTATGGGGCACTTTTCAAATATTTGCACAAGATACAAGTTGAGTAGGAAGACCAAAAAGATGATACAGGAGATTTCTCAACTCCTAGTAGAAAGAAAATTTGACAGAATTTCTTACCGTGCTGCTTCTCATGTCACAGTACCACCGTTCCGTAGAAGTTTTCAGGCCCTGCACTCCAGAACGTCAATGTTGAATGATATTATGTTGGCACTGAAGAATCCTAACATCTTCATTATTGGGGTGTATGGGATGGGTGGAGTGGGCAAGACTACACTAGTGAAAGAGTTAGCTTGGCAAGCTGAGAATGATGGGTCATTTAGTGCTGTAGCTACGGCTACTATCACTGATTCTCCAGATGTGGAAAAAATTCAAGGTCAAATTGCTGATGCCTTGGATCTGAAATTTAACAAGGAGACCAAAGAAGGAAGAGCAGCACAATTACGAGAAAGAATAACCAAGGAGAAGAGTATTCTTGTTATTTTGGATGACATTTGGGGGAGATTTGATTTGACAGACCTGGGGTTTCCTTTTGGTAATGATCACAAAGGATGCAAGTTGGTGGTAACATCCAGAGATCTTAATGTGTTGAACTGTGAGATTGGCACTCAAAAAGAATTTAGACTTGAAGTTTTACTTGAGGATGATAGTTGGGAATTGTTTGAGAAAATGGCAGGTGATGTTGTTCAAGAATTCAATATAAAGCCAATTGCAGAAAAAGTGGCTAAATGTTGTGCTGGTTTGCCCCTTTTGATAGTTACAGTGGCAAAGGCTTTGAGGAAAAAGGATGTCTCTGACTGGAAGGATGCCTTAAATGAATTAGAGAGATTTGATCAAGAAGGGTTGCATAAGAAAGTGTATTCTACTCTGGAGTTGAGTTATAATTGTTTAGAGAGTGAGGAACTGAAGTTGCTATTCTTATTCATTGGTTCTTCTGGAGTAGACCATATCCATACCGGAGAGTTGTTTTCATGTTCTTGGGGGTTTGGCATATATAGGCATGCTCGCACGTTGACACATGCAAGAAATAGATGCTACAAATTAATAAATGACCTCAAGGCCTCTTCATTGTTACTTGAGTCCAAAACTGAATTTGTTTACATGCATGATGTTGTTAGAGAGGTGGCTAAATCAATTGCCTCTAGGCTTCATCCTATCTATGGCGTGCAAAGGTATACTGTACTGAAAAAATGGCCAAAGATAGATCAGCTTCAAAAGTTAGATGCAATTGTTGTGCCTTGGTCTTACATTCACGAACTTCCTGAAAAGTTAGATTGCCCAGAGTTGAAACTACTTGTGCTTCAAACTATAGGCGACTATTTGAAAATCCCTGGTGAGTTTTTTTCTGTGACGAGAGAATTAAAGGTTCTTGATTTATATGGAATGATGTTGACACCTTCTCCACCTCATTCCCTCCACCTCTTGACAAACATTCAATCATTAGCTCTTTCTGGATGTGTGTTAGCAGACATATCAATAGTTGCAGAGCTGAAAAGTTTAGAGATTCTCAGCCTTGAAAAATCTGATATTATTGAACTTCCAAAGGAAATTGGACAACTAGCTAATCTTCGGATGCTGAATCTAACCAGCTGCTCTCGACTCAGATTCATTCCTGCAAATCTTCTTTCAAGCTTGACGTGCTTGGAAGAGTTGTACATGGGGAATTGCTTTATCCAATGGAACGTCAAGGGAAGCAAAGATCAAAGCAACAATGCAAGTCTAGATGAGCTAAGCAATTTGTCTCACCTAACAAGTTTAGACATTACAATTCAGGATGCTTCAGTTTGGCCAATGGACTTGCAGATATTTGCAAAGCTTGAAAGATACAACATATTTATTGGTGACATGTGGAAATGGTCTTTGCAAATGGCTGGAGGTGCTTCTGAATCTTCAAGAACACTCAAGCTCATGGAAAGTGATAGTTCAAGCATTCTTTTGGACTCGGGGTTTAACTTCTTGTTGAATTCAGCTGTGGACATGTGCCTAGTTAGATTACAGTGTGGTAAAGATGTCCTTTTTGAACTAAACAAGGAAGGTTTTCCACAGGTAAAGCATTTATGCATTCAAGACAGTGTTGAGCTGAAGTTCATCATTAACTCAGTGGGGTGGATCCATCCTTATCCTGCTTTCCTCGGCTTAGAGACTTTGGTGCTTCAAAATCTGTTTAATTTGGAAGAAATATGCCATGGCCCAATTCCAATTCAATCTCTTACCAAATTAAAATCTATTGAAGTCAAAGAAATCGTAGCTGTGCAAACATCTGAAGCTGATAAAGATATCAACAAGGTTATGTTCCCCATGTTGCGTTCTCTTGAACTTGAACGTTTGCCGAGTCTCGTTAGTTTCTGTTCTGTGCCATTGACAGCTGGACAATCCACACCTTTGGGACTAATTGATAAAAAGGTTGGGATGCCCCACCTTGAACTCTTGAAGCTGTCTAATATCAACTCTAGGAAATTGTGGGATGACAACCTTCCAGTGGCTATAGAACTTGTAAACCTGCATTATCTTGGGATTAGTAATTGTGCAATGATGGAGGAGATATTTGTCTCGGATAGAAAGTTAGGTAGTCTTCCTTCTCAGAAACCATTGTCCGGTGATGAGGTTATATTTCCAAACTTGGAGACATTGGAAATCTCCCACATGGAACACTTGAAGACAGTTTGGCACAATCAACTAGCTCCAAATTCTTTCCGCAAACTGAAGCAGTTGAAAATTGAATCCTGCAATAAATTATCAAATGTATTTCCATCCTATGTGCTTGATAAATTACAGAATTTGGAGACAGTGACTGTAAGTGATTGTCATGCACTGGAATTTGTATTTGAAACTCAAGGTCTTAAAGCAGATGGTGGCAGACAAACAGGGTTAGAAATGAAATTGGGAACTCTCACTTTGAAACATTTACCCATGCTTAAACACATATGGAGTGGGAATCCTAATAAAATTTTGAACTTTCAAAACCTCTGCCAATTGAAAGTTATTGGATGCCAAAACCTTAATCATGTTTTTCCTCTCTGTGTGGCTAAAGAGCTTCAGCATCTCCAAGTGCTTCATATAGAAGAATGTGGCATAGAGATTATTGTAGCACAGGATGGAATTGCTGACACAACTCCAATGCTTAATTTTCCAAAATTAATAACTTTGTGTTTTCGAGAATTGACACAACTTCGAAGCTTCTATCATGTATCATATACCTTGAATTGTCCTGTTTTAAGGGATGTGGATGTGTTTCATTGTGACAATCTCATACTATTCAAGCCAAAGTCTTTAAATAACCGTGGCAGTGTTTCAGTTGACACATTACCCCTTCTCTCGATTGAAAAGGTTGTCACCAACACAAAGGAGCTTATTCTGACTTGCAAGGATGTCACCGTGTTATGCAGCGGTCAACTTAATGATGAGCCTATCTACACAGTTAAAGCTCTTTGCCTGCGTTGTTTTCATGATGGGTCTGACAACTTTCCATATGGTTTCATCCAAAGATTTATCAATCTTGAAAATCTTAAGGTGTCTTGTAGTTCTTTCACGGAGATTTTCTCAAGTGGAAGCTTTGGCACTGAACATTCTGAAACAAAGGTGAAGTTGAGAAAACTAGTACTTGTTGAATTAAAAAACCTTGAGTTTATATGTAAAGAGAAATATGAGGTGCATGTTCTTCAAAACATTGAAATATTGGAAGTATCTAAATGCTCTAGACTGAAAAATATAGTTCCATCCTCAGTGCTGTTTGGGAATTTAGAGAAGTTGATGGTAAGCTATTGTGCTGGATTAGAAAATATTATGAAATCTTCAGTGATCAATAATATACAAAAACTTAGAATATTATGCATAGATGGTTCTGAAAAGATAGAAGAAATAATTGCAAGTGATGATATGAATGATGCTTCTGAGCTTGCTTTTATGAAATTGGAGTATTTGCGATTGGATAACTTACCAAGGCTAAGAAGTTTTTGCAAGGGAAAACATAGCTTCAAATTTCCACTACTGCAGAGGTTACTTGTAATAGATTGTCCTATGATGGAAACTTTCTCACATGGAGTCTTGAACGCACCAAAGCTCAGAGCAGTACATGTGAAGCGAAAAGATGAATGGCATTGGAATGGTGACATTAATTCTACTATAAGAAAATTTGTAGCAAAAAAAGGTAATAACTCTAAGGATGATTGTGTTTGTCCTCAAAATTTGAATGGAGACTCTAGTAGATAA 4494 0.3803 MDFFISLAGKVAEYMVEPIGRQFGYILYYKGNLAKMKTDVQNLEGIKDIVQHTVDEARRTGEEIENIVKNWLITVDNTNAEANKLIHTEDHAKAQCSMGHFSNICTRYKLSRKTKKMIQEISQLLVERKFDRISYRAASHVTVPPFRRSFQALHSRTSMLNDIMLALKNPNIFIIGVYGMGGVGKTTLVKELAWQAENDGSFSAVATATITDSPDVEKIQGQIADALDLKFNKETKEGRAAQLRERITKEKSILVILDDIWGRFDLTDLGFPFGNDHKGCKLVVTSRDLNVLNCEIGTQKEFRLEVLLEDDSWELFEKMAGDVVQEFNIKPIAEKVAKCCAGLPLLIVTVAKALRKKDVSDWKDALNELERFDQEGLHKKVYSTLELSYNCLESEELKLLFLFIGSSGVDHIHTGELFSCSWGFGIYRHARTLTHARNRCYKLINDLKASSLLLESKTEFVYMHDVVREVAKSIASRLHPIYGVQRYTVLKKWPKIDQLQKLDAIVVPWSYIHELPEKLDCPELKLLVLQTIGDYLKIPGEFFSVTRELKVLDLYGMMLTPSPPHSLHLLTNIQSLALSGCVLADISIVAELKSLEILSLEKSDIIELPKEIGQLANLRMLNLTSCSRLRFIPANLLSSLTCLEELYMGNCFIQWNVKGSKDQSNNASLDELSNLSHLTSLDITIQDASVWPMDLQIFAKLERYNIFIGDMWKWSLQMAGGASESSRTLKLMESDSSSILLDSGFNFLLNSAVDMCLVRLQCGKDVLFELNKEGFPQVKHLCIQDSVELKFIINSVGWIHPYPAFLGLETLVLQNLFNLEEICHGPIPIQSLTKLKSIEVKEIVAVQTSEADKDINKVMFPMLRSLELERLPSLVSFCSVPLTAGQSTPLGLIDKKVGMPHLELLKLSNINSRKLWDDNLPVAIELVNLHYLGISNCAMMEEIFVSDRKLGSLPSQKPLSGDEVIFPNLETLEISHMEHLKTVWHNQLAPNSFRKLKQLKIESCNKLSNVFPSYVLDKLQNLETVTVSDCHALEFVFETQGLKADGGRQTGLEMKLGTLTLKHLPMLKHIWSGNPNKILNFQNLCQLKVIGCQNLNHVFPLCVAKELQHLQVLHIEECGIEIIVAQDGIADTTPMLNFPKLITLCFRELTQLRSFYHVSYTLNCPVLRDVDVFHCDNLILFKPKSLNNRGSVSVDTLPLLSIEKVVTNTKELILTCKDVTVLCSGQLNDEPIYTVKALCLRCFHDGSDNFPYGFIQRFINLENLKVSCSSFTEIFSSGSFGTEHSETKVKLRKLVLVELKNLEFICKEKYEVHVLQNIEILEVSKCSRLKNIVPSSVLFGNLEKLMVSYCAGLENIMKSSVINNIQKLRILCIDGSEKIEEIIASDDMNDASELAFMKLEYLRLDNLPRLRSFCKGKHSFKFPLLQRLLVIDCPMMETFSHGVLNAPKLRAVHVKRKDEWHWNGDINSTIRKFVAKKGNNSKDDCVCPQNLNGDSSR 1497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g02286 1497 SMART AAA_5 171 302 IPR003593 GO:0016887
Trre9g02286 1497 SUPERFAMILY L domain-like 892 1198 - -
Trre9g02286 1497 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 1203 1449 - -
Trre9g02286 1497 FunFam Probable disease resistance protein At1g61300 143 299 - -
Trre9g02286 1497 Pfam NB-ARC domain 162 390 IPR002182 GO:0043531
Trre9g02286 1497 Gene3D - 306 393 IPR042197 -
Trre9g02286 1497 SUPERFAMILY L domain-like 463 1438 - -
Trre9g02286 1497 Gene3D Ribonuclease Inhibitor 1240 1463 IPR032675 -
Trre9g02286 1497 Gene3D Ribonuclease Inhibitor 722 1186 IPR032675 -
Trre9g02286 1497 Gene3D Ribonuclease Inhibitor 459 707 IPR032675 -
Trre9g02286 1497 Gene3D - 132 302 IPR027417 -
Trre9g02286 1497 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 139 404 IPR027417 -
Trre9g02286 1497 PRINTS Disease resistance protein signature 340 354 - -
Trre9g02286 1497 PRINTS Disease resistance protein signature 247 261 - -
Trre9g02286 1497 PRINTS Disease resistance protein signature 613 629 - -
Trre9g02286 1497 PRINTS Disease resistance protein signature 174 189 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g02286 Trre-Chr9 25895423 25901622 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g02286 168 477 WRKY Transcription Factor Family AT5G45050 27.385 2.32e-07 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g02286 - - mtr:25487104 1956.8