Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g02285 ATGGCGTCATCATCAGCACCTCAAGTCATAACTTGCAAAGCTGCAGTGGCATGGGGAGCTGGAGAGGCATTGGTAATGGAAGAAGTGGAAGTCAGTCCTCCCCAACCATTGGAGATTAGGATTAAGGTTGTCTCCACGTCTATCTGTTGTAGCGATCTTGCTGCTTGGAAACATCATACCATATTTCCTCGCATATTTGTGGTTGTTGAGAGTGTAGGGCAAGGAGTGACAGAATTCAAAGAAGGGGACCATGTGTTAACAGTTTTCATCGGAGAATGCATGTCATGTAAAATGTGCAAATCAGGAAAGAGTAGTATTTGTCAAGTTTTGGGATTCGAAAGAAAGGGTTTAATGCATAGCGATCAAAAGACGCGATTCATGATAAAAGGGAAGCCTGTTTATCATTATTGTGCAGTTTCAAGTTTTAGCGAATATACGGTAGTCCATTCTGGATGTGCAGTGAAAATCAGTCCTCATGTACCTCTTGAGAAAGTATGTCTTCTCAGCTGTGGTGTTGCTGCAGGTATAGGTGCAGCATGGAATGTTGCTGATGTATCAAAAGGATCAATAGTGGTTATATTTGGTCTTGGAACTGTTGGCCTTTCTGTTGCTCAAGGTGCCAAACTAAGGGGTGCATCGAGAATAATAGGCGTTGACAATAATCCAAGGAAGTGCGAAAATGCTAAAGTTTTTGGGATTACAGAAGTTGTTTATCCGAATTCGTGCAAAGAACCTATCTCGCAGGTTATAAAGGGCATTACTGATGGTGGAGCAGATTTCTGTTTTGAATGTGGATGGGGTGTGACTGTAGCACTTGGGGTGCCAAGGCTGAAGCCTAAGATCTCAGCTCATTATTCTCTATTCCTTAGAGGAAGAAATTTAAAAGGATCTATATTTGGAGGATGGAAACCTAAATCTGATCTTCCTTCATTGGTAGAAAAGTATATGAATAAGGAAATCCAGATTGATGATTACATAACACACAATTTGCCATTTGATGACATTAACAAAGCTTTCAATCTCATGACAGAAGGAAAGTGTCTTCGTTGTGTTATCCACATGCCAAGATAA 1071 0.409 MASSSAPQVITCKAAVAWGAGEALVMEEVEVSPPQPLEIRIKVVSTSICCSDLAAWKHHTIFPRIFVVVESVGQGVTEFKEGDHVLTVFIGECMSCKMCKSGKSSICQVLGFERKGLMHSDQKTRFMIKGKPVYHYCAVSSFSEYTVVHSGCAVKISPHVPLEKVCLLSCGVAAGIGAAWNVADVSKGSIVVIFGLGTVGLSVAQGAKLRGASRIIGVDNNPRKCENAKVFGITEVVYPNSCKEPISQVIKGITDGGADFCFECGWGVTVALGVPRLKPKISAHYSLFLRGRNLKGSIFGGWKPKSDLPSLVEKYMNKEIQIDDYITHNLPFDDINKAFNLMTEGKCLRCVIHMPR 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g02285 356 Pfam Zinc-binding dehydrogenase 199 264 IPR013149 -
Trre9g02285 356 FunFam S-(hydroxymethyl)glutathione dehydrogenase 175 265 - -
Trre9g02285 356 Gene3D - 15 349 - -
Trre9g02285 356 PANTHER ALCOHOL DEHYDROGENASE 8 352 - -
Trre9g02285 356 FunFam Uncharacterized protein 298 349 - -
Trre9g02285 356 Gene3D - 175 297 - -
Trre9g02285 356 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 160 318 IPR036291 -
Trre9g02285 356 SUPERFAMILY GroES-like 6 180 IPR011032 -
Trre9g02285 356 Pfam Alcohol dehydrogenase GroES-like domain 38 154 IPR013154 -
Trre9g02285 356 SUPERFAMILY GroES-like 305 353 IPR011032 -
Trre9g02285 356 FunFam Alcohol dehydrogenase 6 15 190 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g02285 Trre-Chr9 25889074 25893930 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g02285 38 107 Monolignol Biosynthesis Gene Families AT2G21730 35.443 1.29e-06 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g02285 K00001 - gmx:100819938 600.897