Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g02284 ATGGCGTCATCATCAGCACCTCAAGTCATAACTTGCAAAGCTGCAGTGGCATGGGGAGCTGGAGAGGCATTGGTAATGGAAGAAGTGGAAGTCAGTCCTCCCCAACCATTGGAGATTAGGATTAAGGTTGTCTCCACGTCTATCTGTTGTAGCGATCTTGCTGCTTGGAAACATCATACCATATTTCCTCGCATATTTGTGGTTGTTGAGAGTGTAGGGCAAGGAGTGACAGAATTCAAAGAAGGGGACCATGTGTTAACAGTTTTCATCGGAGAATGCATGTCATGTAAAATGTGCAAATCAGGAAAGAGTAGTATTTGTCAAGTTTTGGGATTCGAAAGAAAGGGTTTAATGCATAGCGATCAAAAGACGCGATTCATGATAAAAGGGAAGCCTGTTTATCATTATTGTGCAGTTTCAAGTTTTAGCGAATATACGGTAGTCCATTCTGGATGTGCAGTGAAAATCAGTCCTCATGTACCTCTTGAGAAAGTATGTCTTCTCAGCTGTGGTGTTGCTGCAGGTATAGGTGCAGCATGGAATGTTGCTGATGTATCAAAAGGATCAATAGTGGTTATATTTGGTCTTGGAACTGTTGGCCTTTCTGTTGCTCAAGGTGCCAAACTAAGGGGTGCATCGAGAATAATAGGCGTTGACAATAATCCAAGGAAGTGCGAAAATGCTAAAGTTTTTGGGATTACAGAAGTTGTTTATCCGAATTCGTGCAAAGAACCTATCTCGCAGGTTATAAAGGGCATTACTGATGGTGGAGCAGATTTCTGTTTTGAATGTGTAGGTGACAGTGATATGTTAACCACTGCATTAGAGTCATGTTGTGATGGATGGGGTGTGACTGTAGCACTTGGGGTGCCAAGGCTGAAGCCTAAGATCTCAGCTCATTATTCTCTATTCCTTAGAGGAAGAAATTTAAAAGGATCTATATTTGGAGGATGGAAACCTAAATCTGATCTTCCTTCATTGGTAGAAAAGTATATGAATAAGGAAATCCAGATTGATGATTACATAACACACAATTTGCCATTTGATGACATTAACAAAGCTTTCAATCTCATGACAGAAGGAAAGTGTCTTCGTTGTGTTATCCACATGCCAAGATAA 1119 0.4084 MASSSAPQVITCKAAVAWGAGEALVMEEVEVSPPQPLEIRIKVVSTSICCSDLAAWKHHTIFPRIFVVVESVGQGVTEFKEGDHVLTVFIGECMSCKMCKSGKSSICQVLGFERKGLMHSDQKTRFMIKGKPVYHYCAVSSFSEYTVVHSGCAVKISPHVPLEKVCLLSCGVAAGIGAAWNVADVSKGSIVVIFGLGTVGLSVAQGAKLRGASRIIGVDNNPRKCENAKVFGITEVVYPNSCKEPISQVIKGITDGGADFCFECVGDSDMLTTALESCCDGWGVTVALGVPRLKPKISAHYSLFLRGRNLKGSIFGGWKPKSDLPSLVEKYMNKEIQIDDYITHNLPFDDINKAFNLMTEGKCLRCVIHMPR 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g02284 372 PANTHER ALCOHOL DEHYDROGENASE 8 368 - -
Trre9g02284 372 SUPERFAMILY GroES-like 321 369 IPR011032 -
Trre9g02284 372 Gene3D - 15 365 - -
Trre9g02284 372 SUPERFAMILY GroES-like 6 180 IPR011032 -
Trre9g02284 372 FunFam Alcohol dehydrogenase 6 15 190 - -
Trre9g02284 372 Pfam Alcohol dehydrogenase GroES-like domain 38 154 IPR013154 -
Trre9g02284 372 FunFam Uncharacterized protein 314 365 - -
Trre9g02284 372 FunFam S-(hydroxymethyl)glutathione dehydrogenase 175 313 - -
Trre9g02284 372 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 160 334 IPR036291 -
Trre9g02284 372 Gene3D - 175 313 - -
Trre9g02284 372 Pfam Zinc-binding dehydrogenase 199 320 IPR013149 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g02284 Trre-Chr9 25889074 25893930 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g02284 9 107 Monolignol Biosynthesis Gene Families AT2G21730 31.532 1.40e-06 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g02284 K00001 - gmx:100819938 639.032