Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g02271 ATGACCCATGTTATATACCTATTGCACGAGTCATATGATAGAGAAGGTTTAATGGCATTGAAAACTCTTTACTTAGAGAAATTGCCAAACCTTATTGGGTTATCAAGGGAAGAAAGAGAGAATATGTTTCCGTGTCTTAAAGCAATTGAAATCACTGAATGTCCTAATCTATTTGGCTTGCCCTGCCTTCCATCTCTCAATGGTCTGTATATACAAGGGAAATACAATCAACAATTACCAGGTTCAATTCATAAACTAGGTAATCTTGAAACTCTACATTTTTCTGATAATGAAGAGTTAATTTACTTTCCAGATGGAACCTTAGGAAACCTTGCATCTCCTTTAAATACATTGGGTTTTCACCGGCATTCCAAACTTATGATGCTTCCAACTGAAATGATTCATCTGCATGCTCTCCAACAACTGTATGTTAACTATTGCAGAAATATTGAGGCATTACCAAATGAAGTAATGCAAAGGCTACATTCTCTCAAGAAGTTAGATATTGTCGGGTGCGATAAGTTCAAATTGTCATCAGGTTTTCAGTATCTAACTTGTCTTGAGACATTGGCCATTGGAAGTTGTTTAGAACTGGCGACATATTATAAGTTGTGCACATGTGAATTACTAAACTTTATCAGATCCTCTTGTAGAGAAATATGCAAGGCCAAGTTGTAG 678 0.3599 MTHVIYLLHESYDREGLMALKTLYLEKLPNLIGLSREERENMFPCLKAIEITECPNLFGLPCLPSLNGLYIQGKYNQQLPGSIHKLGNLETLHFSDNEELIYFPDGTLGNLASPLNTLGFHRHSKLMMLPTEMIHLHALQQLYVNYCRNIEALPNEVMQRLHSLKKLDIVGCDKFKLSSGFQYLTCLETLAIGSCLELATYYKLCTCELLNFIRSSCREICKAKL 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g02271 225 Gene3D Ribonuclease Inhibitor 63 221 IPR032675 -
Trre9g02271 225 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 57 114 200 - -
Trre9g02271 225 SUPERFAMILY L domain-like 15 195 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g02271 Trre-Chr9 25342098 25343241 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g02271 25 190 WRKY Transcription Factor Family AT4G12020 26.347 9.25e-06 44.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g02271 - - mtr:11422626 347.051