Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g02247 ATGGTGTTGTGCCTCCTAATTAATGTTTCGCTCCAAATAGGTCTTGAGTTAGTCTTGTGGAAGACTGTATCTGACATTACTAAGGATATGAAGGTCCTTAAGAAGATCTTGAAGGAAGGAGAGGGATATGAACAACCAAATGATGGAGCTATGATTCAAGTGAAACTTATCGGGAAGCTGCAAGATGAGACTGTCTTCCTTAAGAAGGGTCATGATGATGATCAGCCATTTGAGTTCAGAATTGATGAAGAACCAGTAATTGATGGACTTGATAGAGCTGTGAAGAACATGAAGAAAGGGGAAATTGCGTTGGTGATCATACAACTTGATCGAATGCTTTTGGTTAATCTGCTCAGGAATTGGCTACTGTTCCTCCTAATTCCACTGTTTACTATGAAGTTGAGCTGA 408 0.3995 MVLCLLINVSLQIGLELVLWKTVSDITKDMKVLKKILKEGEGYEQPNDGAMIQVKLIGKLQDETVFLKKGHDDDQPFEFRIDEEPVIDGLDRAVKNMKKGEIALVIIQLDRMLLVNLLRNWLLFLLIPLFTMKLS 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g02247 135 Gene3D - 22 112 IPR046357 GO:0003755
Trre9g02247 135 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 49 107 IPR001179 GO:0003755
Trre9g02247 135 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 28 108 - -
Trre9g02247 135 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 43 108 IPR001179 GO:0003755
Trre9g02247 135 SUPERFAMILY FKBP-like 26 109 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g02247 Trre-Chr9 25093265 25093891 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g02247 8 116 Calmodulin-binding Proteins AT3G25230 64.545 5.10e-43 147
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g02247 K09571 - pvy:116139086 166.777