Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g02212 ATGGAAGAACATCTTACTCCATTAGCTGTTACTCATCTTCTTCAACACACTCTAAGAAGTTTATGCATCCATGAAAATTCTCAATGGGTTTATGCTGTTTTTTGGAGGATCTTGCCTAGGAACTACCCTCCACCAAAATGGGAAGGACAAGGGGCATATGATAGATCAAGAGGAAACAGAAGGAATTGGATATTAGTTTGGGAAGATGGATTCTGCAATTTTGCAGCATCAGCAGCAGCACCTGAAATAAACTCTGGTGGTAGTGATTGTCCTAACTCATCATCAGTTTATGGTAACTGTGAATTAATTCAACCTTACCAAGGTCTTCAACCTGAACTTTTCTTCAAGATGTCACATGAGATCTATAACTATGGTGAAGGATTGATTGGAAAAGTAGCTGCAGATCACAGTCACAAGTGGATATACAAAGAGCCTAATGATCAAGAAATTAACTTCTTATCAGCATGGCATAATTCAGCTGACTCACACCCTAGGACATGGGAAGCTCAGTTCTTGTCTGGTATAAAGACTATAGCCCTCATTGCTGTTAGAGAAGGTGTTGTTCAATTAGGAGCTGTTCACAAGGTGATTGAAGACTTAAGCTATGTGGTTTTATTAAGAAAAAAGTTGAGCTACATTGAAAGCATACCAGGAGTACTTCTACCACACCCTTCATCATCGGCATACCCTTACAAACTAGAACCCTATGGTAATATTCCACCAGAACAATGGCATAATTACCAAGGAATTAGTTATGCACCACAACAACAAAGTGATCAATTATATGATCATTTCAACAACATGCCAATGAAAGTAACACCATCAATGAGTAGTCTTGAAGCATTACTCTCAAAGTTACCTTCAGTTGTTCCACCACAACAATCATCTCAACAACAAGAAGAACAAAGAGCATTGGAATTTATGGGAGGAATGCAAAAAGTTGCAAAAGAAGAGTTAGATGAAGAACAAGAAGAGATATATAGACCTGAACAAGTTGATGTTGGTGAGAGTAGCACTAGTTCCATGTCAAGGTACCAACATCATCATCATTTCCATCAAGACCATCATCATCATCTTGGGAATGGGTCAAACAATAATAATGGATTTTGA 1110 0.382 MEEHLTPLAVTHLLQHTLRSLCIHENSQWVYAVFWRILPRNYPPPKWEGQGAYDRSRGNRRNWILVWEDGFCNFAASAAAPEINSGGSDCPNSSSVYGNCELIQPYQGLQPELFFKMSHEIYNYGEGLIGKVAADHSHKWIYKEPNDQEINFLSAWHNSADSHPRTWEAQFLSGIKTIALIAVREGVVQLGAVHKVIEDLSYVVLLRKKLSYIESIPGVLLPHPSSSAYPYKLEPYGNIPPEQWHNYQGISYAPQQQSDQLYDHFNNMPMKVTPSMSSLEALLSKLPSVVPPQQSSQQQEEQRALEFMGGMQKVAKEELDEEQEEIYRPEQVDVGESSTSSMSRYQHHHHFHQDHHHHLGNGSNNNNGF 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g02212 369 MobiDBLite consensus disorder prediction 318 369 - -
Trre9g02212 369 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 14 207 IPR025610 -
Trre9g02212 369 PANTHER TRANSCRIPTION FACTOR MYC/MYB-RELATED 1 347 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g02212 Trre-Chr9 24158604 24160701 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g02212 15 207 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31280 30.928 2.02e-15 75.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g02212 - - vun:114173114 544.658
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre9g02212 9 24158604 24160701 Trre9g02212 9 24158604 24160701 ECH