Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g02155 ATGAAGTTGAGCATCCTAAGAAGGCTTTCGGTTGGGCAGCTAGAGATACTTCTGGTGTTCTCTCCCCTTTTAATTTCTCTAGATGAGAAACAAGTGAAGAATGAATGGGGCACTACCGACTATCCATTAGTTCCCGGACATGAGATTGTTGGCATAGTGACAGAGGTTGGAAATAAAGTGAGAAAGTTCAAAGTTGGAGACAGAGTAGGTGTGGGATGTTTGGTTGATTCTTGTCACTCATGCCAAAATTGTGCTAATAATCTTGAGAATTATTGTCCCAAATTTACACTCACTGATGGTTCCAAATATAGTGATGGAACCGCCACGCATGGCGGTTACTCTGACTCAATGGTTTCAGATGAGCACTTTATTTTTCACATTTCAGATGAGTTACCTCTTGATGCCGCCGCACCTCTGCTCTGTGCTGGTATAACGGTATATAGTCCTTTTAGATATTTTGGACTCGACAAGCCGGTACATCACCTAGCAAAAAAAAAGGAAGCAATAGAAAACTTGGGGGCGGATTCATTTTTAATAAGTCGCGACCAAGATCAAATGAATGCTGCAACGGGTACTTTGGATGGAATAATCGATACAGTTTCAGCAGATCATCCTTTATTACCTTTGATTGGTTTACTTAAGTGTCATGGAAAGCTTGTAATGGTTGGTGCACCTGAAAAGCCTCTAGAGCTTCCAATTTTTCCTTTACTTGCAGGGAGAAAGATAGTAGCTGGAAGTTTAATTGGAGGGATAAAGGAGACTCAAGAAATGATTGATTTTGCAGCAAAGTATAATGTAAAGCCTGATATTGAGATCATTCCTATTGATTATGTCAATATAGCAATGGAGCGTCTCCTTAAAGCAGATGTGAAATATCGCTTTGTGATTGATATTGGAAACACATTAAAACCAAGCTACTAA 921 0.3974 MKLSILRRLSVGQLEILLVFSPLLISLDEKQVKNEWGTTDYPLVPGHEIVGIVTEVGNKVRKFKVGDRVGVGCLVDSCHSCQNCANNLENYCPKFTLTDGSKYSDGTATHGGYSDSMVSDEHFIFHISDELPLDAAAPLLCAGITVYSPFRYFGLDKPVHHLAKKKEAIENLGADSFLISRDQDQMNAATGTLDGIIDTVSADHPLLPLIGLLKCHGKLVMVGAPEKPLELPIFPLLAGRKIVAGSLIGGIKETQEMIDFAAKYNVKPDIEIIPIDYVNIAMERLLKADVKYRFVIDIGNTLKPSY 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g02155 306 FunFam Cinnamyl alcohol dehydrogenase 159 268 - -
Trre9g02155 306 Pfam Alcohol dehydrogenase GroES-like domain 31 126 IPR013154 -
Trre9g02155 306 SMART PKS_ER_names_mod 12 296 IPR020843 GO:0016491
Trre9g02155 306 SUPERFAMILY GroES-like 28 154 IPR011032 -
Trre9g02155 306 FunFam Putative cinnamyl alcohol dehydrogenase 6 269 298 - -
Trre9g02155 306 Pfam Zinc-binding dehydrogenase 163 262 IPR013149 -
Trre9g02155 306 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 46 60 IPR002328 GO:0008270|GO:0016491
Trre9g02155 306 CDD CAD1 28 297 IPR047109 GO:0016616
Trre9g02155 306 Gene3D - 25 159 - -
Trre9g02155 306 Gene3D - 160 268 - -
Trre9g02155 306 PANTHER ALDEHYDE REDUCTASE 28 162 IPR047109 GO:0016616
Trre9g02155 306 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 131 266 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g02155 Trre-Chr9 22908014 22914305 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g02155 28 305 Monolignol Biosynthesis Gene Families AT4G37990 62.013 4.32e-126 362
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g02155 K23232 - gmx:100816901 445.662