Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g02146 ATGGAAGATTCTAACGACTCCATTTTCGATTCAATCCTCTGTGATTCCACTTCCAGACTCATTCCTACTGGATTCACCGCAAGATATGAAAACGCAGAGGAGTGTGTCATGTTTGTAAATGCGGGTGGGGAAGCGTTTAATGAAGAAGCTGGCGGAGTTAAGTTTCTGGGTGACACTTTTTTTGACGGTGGCAATGTTTTTTGCACTAATGATCCGATAGTGGAAGGTGGAGATTACCCGTCTATATATCAATCAGCTCGGGTGGGAAGTTTTTGTTATAGAATTGATAACCTTTCTCCTGGGTACTATGTTGTTGACCTTCATTTTGTGGAGATTATTAATGTAAATGGGCCAAAAGGAATTAGGGTGTTCGACGTATACATACAAGAAGAAAAGGCTTTATCCGAATTGGATATCTATGCAGTTGTTGGAGTCAACAAGCCACTACAGATGATTGATTATAGGGTCACTGTGAAGGATGACGGTGTTTTAGTCATAAGATTTGAAAGTATAAATGGAAGCCCAGTTGTTAGTGGGATTTGCATTAGGAGAGCGACGACAGTTTCTCCGGTGACGAGTGATTTCATTAAATGTAACGACTGTGCTGCGCTGATTGAAATTCCTTCATCACAGATGAAAGATATGAAGACAAAATCTACAGTGAAGTATGAGAATAAGATAAAGGAGCTCACTGTGCAGTGCGAGCTCAAGGCAAAAGAATGCTATGAGGCATGGATGTCATTAACTGAAACAAGTAGGAGAATGGAAATGATCCAGATGGAGCTTGATCAAGTCACATTTAAGTCACTCACTACTGAACAAACTGTGGAGAAACAAGCTGAGAACCTGAGGAGTATTTCTCACAGGTACGAACTTGATAAGAAGAAATGGGCAGAAGCAATTACTAGTTTACAGGAAAAAGTAAAGGTGATGAGGAGTGAACAATCTCGGCTTTCCTTTGAAGCACATGAGTGTGTCGATTCAATCCCTGAATTAAATAAGATGGTTTTTGCAGTTCAAGAATTGGTTAAGCAGTGTGAAGATCTCAAAGTGAAATACTATGAAGAGATGACACAGAGAAAGAAGCTCTTCAATGAAGTTCAAGAGGCTAAAGGGAACATTCGGGTTTTCTGCCGTTGTCGACCATTGAATAAGGGTGAAATGTCAGCTGGGTGTACAACAGTAGTGGATTTCGATGCATCAAAGGATGGATGCCTTGGAATTTTGACAACTGGCTCCACAAAAAAATTCAGATTTGACAGGGTTTATACACCAAAAGATGATCAAGTTGATGTTTTTGCTGATGCATCACCGATGGTAATCTCTGTGTTGGATGGCTACAACGTTTGCATCTTTGCTTACGGACAAACAGGAACAGGAAAAACATTTACCATGGAAGGAACCGAGCAGAATAGAGGAGTCAATTACAGGACTCTTGAGCACTTGTTTAGAGTTAGTAAGGAGAGGAGTGAAACATTTTCATACGACATATCTGTTAGCGTGCTTGAGGTTTATAATGAACAAATAAGAGATTTATTGGCTACTGGGCCTACATCAAAAAGGTTGGAGATAAAACAAAACTCTGAAGGATATCACCATGTCCCTGGTGTTGTAGAAGCCAAGGTTGACAACATATGTGATGTGTGGAATGTACTGCAGGCTGGAAGCAATGCTAGAGCAGTTGGAAGTAATAACGTTAATGAGCACAGCAGTCGATCTCACTGCATGCTGTGTATAATGGTAAAGGCTAAAAATTTGATGAATGGCGAGTGTACCAAGAGCAAGCTTTGGCTTGTGGATTTGGCTGGTAGCGAGAGACTTGCAAAGACTGATGTGCAAGGGGAGCGACTTAAGGAAGCACAAAATATCAATCGATCTCTTTCTGCTCTTGGAGATGTGATATCCTCTTTAGCAGCCAAAAGTAGTCACATTCCATATAGGAACTCTAAATTGACGCATTTACTCCAAGACTCACTCGGAGGTGACTCAAAAACTTTAATGTTTGTACAAATAAGTCCATCAGATCAGGATGTAGGTGAGACTCTGAGCTCACTTAATTTTGCAACCAGAGTGAGGGGTGTTGAGTTAGGTCCTGTTAAGAAGCAAATTGATACTAGTGAACTTCAAAAGACAAAAGCAATGCTTGAGAAAGCACGGAGTGAGTGCAGAAGTAAAGATGAATCTATGAAAAAACTAGAAGAAAGTTTGCAAATCATTGAGAATAAGGCCAAAGGAAAGGATCATGTCCACAAAAATTTACAAGAAAAGATTAAAGAACTTGAAGGCCAGATTGAGCTCAAAACATCCACGCAAAATCAATCAGAGAAACAAATTTCTCAATTATGTGAAAAGTTGAAGGGAAAAGAAGAAACCTGCTGTACTCTCCAACAAAAGGTCAAAGAGCTCGAGAAAAAAATAAAAGAACAGCTGCAGTCGGAGACTGCAAATTTCCAACAGAAGGTTTGGGATCTAGAGAAAAAGCTGAAAGATCAGTTGCAAGGGTCTGAGTCTGAATCTTCCTTCTTAAAAGATAAGATCAAGGAGCTTGAGAGAAAACTGAAAGAGCAGGAGCAGAACTCAGAAACCTTGCTTAAACAACAGATGAAGGAACTAGAGGAGAAATACAAAGAGCGAGAGCAACAGTGGAAGCAAACTCATTGTTATGTTGAAGCCGTAAAGATGGCCGCCACACCTGACATAGGTAAAAGCCGCACAAGTGATGAATGTCCAAACGAGATTGAGACTCGCATTTTATGTAGTTCAAACTCGGTAAACCGCCAAATAAGTCAAGACTCTGTTTTGATAAAAGGGAATGATTCTACTCATCAGATTAGAAACAAAAGGCATCTCAGAAGCAACGAAATTGAGAACCATTTTCTCTTGCCATCGTCCTCTTTACGCGATAGAAAAATCACAAGGAAATCCGATCCACCACCTAAAATTTTAAGGACCGGTAAGATAACAACAAAACCGACTGCCGTTGCTAGTCAAGCTCCTTTGTCTCATAAGAGAGCTAGCACAAGCAGAGATCAGGCTCAAGGAGTTAAAGAGAGGGACAGTAAGAAGAAAATATGGTCAAGATAG 3084 0.403 MEDSNDSIFDSILCDSTSRLIPTGFTARYENAEECVMFVNAGGEAFNEEAGGVKFLGDTFFDGGNVFCTNDPIVEGGDYPSIYQSARVGSFCYRIDNLSPGYYVVDLHFVEIINVNGPKGIRVFDVYIQEEKALSELDIYAVVGVNKPLQMIDYRVTVKDDGVLVIRFESINGSPVVSGICIRRATTVSPVTSDFIKCNDCAALIEIPSSQMKDMKTKSTVKYENKIKELTVQCELKAKECYEAWMSLTETSRRMEMIQMELDQVTFKSLTTEQTVEKQAENLRSISHRYELDKKKWAEAITSLQEKVKVMRSEQSRLSFEAHECVDSIPELNKMVFAVQELVKQCEDLKVKYYEEMTQRKKLFNEVQEAKGNIRVFCRCRPLNKGEMSAGCTTVVDFDASKDGCLGILTTGSTKKFRFDRVYTPKDDQVDVFADASPMVISVLDGYNVCIFAYGQTGTGKTFTMEGTEQNRGVNYRTLEHLFRVSKERSETFSYDISVSVLEVYNEQIRDLLATGPTSKRLEIKQNSEGYHHVPGVVEAKVDNICDVWNVLQAGSNARAVGSNNVNEHSSRSHCMLCIMVKAKNLMNGECTKSKLWLVDLAGSERLAKTDVQGERLKEAQNINRSLSALGDVISSLAAKSSHIPYRNSKLTHLLQDSLGGDSKTLMFVQISPSDQDVGETLSSLNFATRVRGVELGPVKKQIDTSELQKTKAMLEKARSECRSKDESMKKLEESLQIIENKAKGKDHVHKNLQEKIKELEGQIELKTSTQNQSEKQISQLCEKLKGKEETCCTLQQKVKELEKKIKEQLQSETANFQQKVWDLEKKLKDQLQGSESESSFLKDKIKELERKLKEQEQNSETLLKQQMKELEEKYKEREQQWKQTHCYVEAVKMAATPDIGKSRTSDECPNEIETRILCSSNSVNRQISQDSVLIKGNDSTHQIRNKRHLRSNEIENHFLLPSSSLRDRKITRKSDPPPKILRTGKITTKPTAVASQAPLSHKRASTSRDQAQGVKERDSKKKIWSR 1027
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g02146 1027 ProSitePatterns Kinesin motor domain signature. 594 605 IPR019821 GO:0003777|GO:0005524|GO:0007018
Trre9g02146 1027 MobiDBLite consensus disorder prediction 1009 1027 - -
Trre9g02146 1027 FunFam kinesin-like protein KIN-14R 322 696 - -
Trre9g02146 1027 Gene3D - 31 187 - -
Trre9g02146 1027 SMART kinesin_4 371 702 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre9g02146 1027 FunFam Kinesin-like protein KIN-14R 31 186 - -
Trre9g02146 1027 MobiDBLite consensus disorder prediction 966 1027 - -
Trre9g02146 1027 Pfam Malectin domain 37 180 IPR021720 -
Trre9g02146 1027 PRINTS Kinesin heavy chain signature 446 467 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre9g02146 1027 PRINTS Kinesin heavy chain signature 595 613 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre9g02146 1027 PRINTS Kinesin heavy chain signature 644 665 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre9g02146 1027 PRINTS Kinesin heavy chain signature 564 581 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre9g02146 1027 MobiDBLite consensus disorder prediction 989 1008 - -
Trre9g02146 1027 Coils Coil 807 827 - -
Trre9g02146 1027 Coils Coil 715 777 - -
Trre9g02146 1027 ProSiteProfiles Kinesin motor domain profile. 373 694 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre9g02146 1027 Gene3D Kinesin motor domain 315 696 IPR036961 -
Trre9g02146 1027 PANTHER KINESIN-LIKE PROTEIN KLP-3 51 776 IPR027640 GO:0003777|GO:0007018
Trre9g02146 1027 Coils Coil 832 885 - -
Trre9g02146 1027 Pfam Kinesin motor domain 379 693 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre9g02146 1027 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 373 730 IPR027417 -
Trre9g02146 1027 CDD KISc_C_terminal 371 696 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g02146 Trre-Chr9 22784395 22789886 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g02146 345 747 Calmodulin-binding Proteins AT5G65930 41.463 4.24e-85 298
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g02146 K10406 - gmx:100800016 1605.11