Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Trre9g02144 | ATGGATCCGATTCAACTCAACGATTTTCAAAATCACACACAAACCCTAATTTCAGACCTTCAAGATTCAGTTATGGAAGATTCTAACGACTCCATTTTCGATTCAATCCTCTGTGATTCCACTTCCAGACTCATTCCTACTGGATTCACCGCAAGATATGAAAACGCAGCAGAGGAGTGTGTCATGTTTGTAAATGCGGGTGGGGAAGCGTTTAATGAAGAAGCTGGCGGAGTTAAGTTTCTGGGTGACACTTTTTTTGACGGTGGCAATGTTTTTTGCACTAATGATCCGATAGTGGAAGGTGGAGATTACCCGTCTATATATCAATCAGCTCGGGTGGGAAGTTTTTGTTATAGAATTGATAACCTTTCTCCTGGGTACTATGTTGTTGACCTTCATTTTGTGGAGATTATTAATGTAAATGGGCCAAAAGGAATTAGGGTGTTCGACGTATACATACAAGAAGAAAAGGCTTTATCCGAATTGGATATCTATGCAGTTGTTGGAGTCAACAAGCCACTACAGATGATTGATTATAGGGTCACTGTGAAGGATGACGGTGTTTTAGTCATAAGATTTGAAAGTATAAATGGAAGCCCAGTTGTTAGTGGGATTTGCATTAGGAGAGCGACGACAGTTTCTCCGGTGACGAGTGATTTCATTAAATGTAACGACTGTGCTGCGCTGATTGAAATTCCTTCATCACAGATGAAAGATATGAAGACAAAATCTACAGTGAAGTATGAGAATAAGATAAAGGAGCTCACTGTGCAGTGCGAGCTCAAGGCAAAAGAATGCTATGAGGCATGGATGTCATTAACTGAAACAAGTAGGAGAATGGAAATGATCCAGATGGAGCTTGATCAAGTCACATTTAAGTCACTCACTACTGAACAAACTGTGGAGAAACAAGCTGAGAACCTGAGGAGTATTTCTCACAGGTACGAACTTGATAAGAAGAAATGGGCAGAAGCAATTACTAGTTTACAGGAAAAAGTAAAGGTGATGAGGAGTGAACAATCTCGGCTTTCCTTTGAAGCACATGAGTGTGTCGATTCAATCCCTGAATTAAATAAGATGGTTTTTGCAGTTCAAGAATTGGTTAAGCAGTGTGAAGATCTCAAAGTGAAATACTATGAAGAGATGACACAGAGAAAGAAGCTCTTCAATGAAGTTCAAGAGGCTAAAGGGAACATTCGGGTTTTCTGCCGTTGTCGACCATTGAATAAGGGTGAAATGTCAGCTGGGTGTACAACAGTAGTGGATTTCGATGCATCAAAGGATGGATGCCTTGGAATTTTGACAACTGGCTCCACAAAAAAATTCAGATTTGACAGGGTTTATACACCAAAAGATGATCAAGTTGATGTTTTTGCTGATGCATCACCGATGGTAATCTCTGTGTTGGATGGCTACAACGTTTGCATCTTTGCTTACGGACAAACAGGAACAGGAAAAACATTTACCATGGAAGGAACCGAGCAGAATAGAGGAGTCAATTACAGGACTCTTGAGCACTTGTTTAGAGTTAGTAAGGAGAGGAGTGAAACATTTTCATACGACATATCTGTTAGCGTGCTTGAGGTTTATAATGAACAAATAAGAGATTTATTGGCTACTGGGCCTACATCAAAAAGGTTGGAGATAAAACAAAACTCTGAAGGATATCACCATGTCCCTGGTGTTGTAGAAGCCAAGGTTGACAACATATGTGATGTGTGGAATGTACTGCAGGCTGGAAGCAATGCTAGAGCAGTTGGAAGTAATAACGTTAATGAGCACAGCAGTCGATCTCACTGCATGCTGTGTATAATGGTAAAGGCTAAAAATTTGATGAATGGCGAGTGTACCAAGAGCAAGCTTTGGCTTGTGGATTTGGCTGGTAGCGAGAGACTTGCAAAGACTGATGTGCAAGGGGAGCGACTTAAGGAAGCACAAAATATCAATCGATCTCTTTCTGCTCTTGGAGATGTGATATCCTCTTTAGCAGCCAAAAGTAGTCACATTCCATATAGGAACTCTAAATTGACGCATTTACTCCAAGACTCACTCGGAGGTGACTCAAAAACTTTAATGTTTGTACAAATAAGTCCATCAGATCAGGATGTAGGTGAGACTCTGAGCTCACTTAATTTTGCAACCAGAGTGAGGGGTGTTGAGTTAGGTCCTGTTAAGAAGCAAATTGATACTAGTGAACTTCAAAAGACAAAAGCAATGCTTGAGAAAGCACGGAGTGAGTGCAGAAGTAAAGATGAATCTATGAAAAAACTAGAAGAAAGTTTGCAAATCATTGAGAATAAGGCCAAAGGAAAGGATCATGTCCACAAAAATTTACAAGAAAAGATTAAAGAACTTGAAGGCCAGATTGAGCTCAAAACATCCACGCAAAATCAATCAGAGAAACAAATTTCTCAATTATGTGAAAAGTTGAAGGGAAAAGAAGAAACCTGCTGTACTCTCCAACAAAAGGTCAAAGAGCTCGAGAAAAAAATAAAAGAACAGCTGCAGTCGGAGACTGCAAATTTCCAACAGAAGGTTTGGGATCTAGAGAAAAAGCTGAAAGATCAGTTGCAAGGGTCTGAGTCTGAATCTTCCTTCTTAAAAGATAAGATCAAGGAGCTTGAGAGAAAACTGAAAGAGCAGGAGCAGAACTCAGAAACCTTGCTTAAACAACAGATGAAGGAACTAGAGGAGAAATACAAAGAGCGAGAGCAACAGTGGAAGCAAACTCATTGTTATGTTGAAGCCGTAAAGATGGCCGCCACACCTGACATAGGTAAAAGCCGCACAAGTGATGAATGTCCAAACGAGATTGAGACTCGCATTTTATGTAGTTCAAACTCGGTAAACCGCCAAATAAGTCAAGACTCTGTTTTGATAAAAGGGAATGATTCTACTCATCAGATTAGAAACAAAAGGCATCTCAGAAGCAACGAAATTGAGAACCATTTTCTCTTGCCATCGTCCTCTTTACGCGATAGAAAAATCACAAGGAAATCCGATCCACCACCTAAAATTTTAAGGACCGGTAAGATAACAACAAAACCGACTGCCGTTGCTAGTCAAGCTCCTTTGTCTCATAAGAGAGCTAGCACAAGCAGAGATCAGGCTCAAGGAGTTAAAGAGAGGGACAGTAAGAAGAAAATATGGTCAAGATAG | 3159 | 0.4023 | MDPIQLNDFQNHTQTLISDLQDSVMEDSNDSIFDSILCDSTSRLIPTGFTARYENAAEECVMFVNAGGEAFNEEAGGVKFLGDTFFDGGNVFCTNDPIVEGGDYPSIYQSARVGSFCYRIDNLSPGYYVVDLHFVEIINVNGPKGIRVFDVYIQEEKALSELDIYAVVGVNKPLQMIDYRVTVKDDGVLVIRFESINGSPVVSGICIRRATTVSPVTSDFIKCNDCAALIEIPSSQMKDMKTKSTVKYENKIKELTVQCELKAKECYEAWMSLTETSRRMEMIQMELDQVTFKSLTTEQTVEKQAENLRSISHRYELDKKKWAEAITSLQEKVKVMRSEQSRLSFEAHECVDSIPELNKMVFAVQELVKQCEDLKVKYYEEMTQRKKLFNEVQEAKGNIRVFCRCRPLNKGEMSAGCTTVVDFDASKDGCLGILTTGSTKKFRFDRVYTPKDDQVDVFADASPMVISVLDGYNVCIFAYGQTGTGKTFTMEGTEQNRGVNYRTLEHLFRVSKERSETFSYDISVSVLEVYNEQIRDLLATGPTSKRLEIKQNSEGYHHVPGVVEAKVDNICDVWNVLQAGSNARAVGSNNVNEHSSRSHCMLCIMVKAKNLMNGECTKSKLWLVDLAGSERLAKTDVQGERLKEAQNINRSLSALGDVISSLAAKSSHIPYRNSKLTHLLQDSLGGDSKTLMFVQISPSDQDVGETLSSLNFATRVRGVELGPVKKQIDTSELQKTKAMLEKARSECRSKDESMKKLEESLQIIENKAKGKDHVHKNLQEKIKELEGQIELKTSTQNQSEKQISQLCEKLKGKEETCCTLQQKVKELEKKIKEQLQSETANFQQKVWDLEKKLKDQLQGSESESSFLKDKIKELERKLKEQEQNSETLLKQQMKELEEKYKEREQQWKQTHCYVEAVKMAATPDIGKSRTSDECPNEIETRILCSSNSVNRQISQDSVLIKGNDSTHQIRNKRHLRSNEIENHFLLPSSSLRDRKITRKSDPPPKILRTGKITTKPTAVASQAPLSHKRASTSRDQAQGVKERDSKKKIWSR | 1052 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Trre9g02144 | 1052 | MobiDBLite | consensus disorder prediction | 991 | 1052 | - | - | |
Trre9g02144 | 1052 | PANTHER | KINESIN-LIKE PROTEIN KLP-3 | 67 | 813 | IPR027640 | GO:0003777|GO:0007018 | |
Trre9g02144 | 1052 | SMART | kinesin_4 | 396 | 727 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Trre9g02144 | 1052 | Gene3D | - | 56 | 212 | - | - | |
Trre9g02144 | 1052 | MobiDBLite | consensus disorder prediction | 1034 | 1052 | - | - | |
Trre9g02144 | 1052 | CDD | KISc_C_terminal | 396 | 721 | - | - | |
Trre9g02144 | 1052 | MobiDBLite | consensus disorder prediction | 1014 | 1033 | - | - | |
Trre9g02144 | 1052 | Gene3D | Kinesin motor domain | 340 | 721 | IPR036961 | - | |
Trre9g02144 | 1052 | Coils | Coil | 832 | 852 | - | - | |
Trre9g02144 | 1052 | FunFam | kinesin-like protein KIN-14R | 347 | 721 | - | - | |
Trre9g02144 | 1052 | Coils | Coil | 740 | 802 | - | - | |
Trre9g02144 | 1052 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 398 | 755 | IPR027417 | - | |
Trre9g02144 | 1052 | ProSiteProfiles | Kinesin motor domain profile. | 398 | 719 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Trre9g02144 | 1052 | Coils | Coil | 857 | 910 | - | - | |
Trre9g02144 | 1052 | Pfam | Kinesin motor domain | 404 | 718 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Trre9g02144 | 1052 | FunFam | Kinesin-like protein KIN-14R | 56 | 211 | - | - | |
Trre9g02144 | 1052 | PRINTS | Kinesin heavy chain signature | 620 | 638 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Trre9g02144 | 1052 | PRINTS | Kinesin heavy chain signature | 471 | 492 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Trre9g02144 | 1052 | PRINTS | Kinesin heavy chain signature | 589 | 606 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Trre9g02144 | 1052 | PRINTS | Kinesin heavy chain signature | 669 | 690 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Trre9g02144 | 1052 | ProSitePatterns | Kinesin motor domain signature. | 619 | 630 | IPR019821 | GO:0003777|GO:0005524|GO:0007018 | |
Trre9g02144 | 1052 | Pfam | Malectin domain | 62 | 205 | IPR021720 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Trre9g02144 | Trre-Chr9 | 22784323 | 22789886 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Trre9g02144 | 370 | 772 | Calmodulin-binding Proteins | AT5G65930 | 41.463 | 5.96e-85 | 298 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Trre9g02144 | K10406 | - | gmx:100800016 | 1631.31 |