Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g02125 ATGCCGGATGTTCACATACTTGTTAATGAATTTGTGAATCAGCTTAAAAAACGTAAAATTGAAGGTTCTCAGGCCACAGCAAAGCAGACAGCAGAGTTGCTTCGGTCTGTGATTTCACAGCAAAGGTTGCCTCAAACAAACCAGGCTACAGCTCTGATTAATGCAGTAAGGACTGTGGGGGAGAAGCTTATCGCTGCTAACCCTGTTGAGCTTGCTGTGGGAAATATTGCAAGGCGTGTTTTGCACATTATAAGGGAGGAGGATCTTTCCCTTGCCACAGCTGCTATAGCTGGTTTGGAGCTATCAGGTGTAAGTGATGATGAAGATGATGTGCAGCGAGATGATTATCCTGTTTTATCTGCTGCCGCTGTTGCAGCTGCTGCAAGAAGCACCTTGCGCCCACCATCATTGCAAACTCTTCTAGAGGATGCACCTATTGCAGCCGCCATTCCACACACATCTTCTTCAGGGGGTGATTCTGAAGGGAAAAGTAGATCTGTTGACAAGGGTTCAAGAGGTCGGAAGTTGAAGCATGATGTCATTGAAGCAGTTAATGAACTAATTCAAGACATATCTACTTGCTATGAACAAATAGCTGAACAAGCAGTAGAGCACATTCATCAAAATGAGGTAATATTAACGCTAGGTAGTTCAAAGACAGTTTTGGAATTTCTTTGTGCTGCAAAGGAGAAAAAGAGATCATTTAAGGTCTTTGTCGCAGAAGGTGCCCCAAGATATCAAGGACATCTCCTTGCAAAAGAATTGGCTGCTAGAGGCTTACAGACCACGGTGATTACTGATTCTGCAGTTTTTGCCATGATTTCCCGAGTGAACATGGTTATCGTTGGAGCTCATGCTGTCATGGCTAATGGTGGAGTCATTGCCCCGGTTGGATTAAGTATGGTTGCACTTGCAGCTCAAAGGCATGCTGTTCCTTTTGTTGTACTTGCTGGAAGTCACAAGTTGTGCCCTCTGTATCCGCACAATCCTGAAGTCTTGTTGAATGAGTTGAGATCCCCGTCTGAGCTACTTGACTTTGGGGACTTCTCAGATTGCATGGATTCTGCAAGTGGTGGAGGTTCTCTTCACGTCGTTAACCCAACATTTGATTATGTGCCACCAAAACTTGTTAGTCTCTTTATTACTGACACAGGAGGGCATAACCCATCATACATGTACCGGCTCATTGCCGACTACTACTCAGCTGATGATTTGGTGGTGAAACGAAGACCTGCTACTGGAATTTGA 1248 0.4463 MPDVHILVNEFVNQLKKRKIEGSQATAKQTAELLRSVISQQRLPQTNQATALINAVRTVGEKLIAANPVELAVGNIARRVLHIIREEDLSLATAAIAGLELSGVSDDEDDVQRDDYPVLSAAAVAAAARSTLRPPSLQTLLEDAPIAAAIPHTSSSGGDSEGKSRSVDKGSRGRKLKHDVIEAVNELIQDISTCYEQIAEQAVEHIHQNEVILTLGSSKTVLEFLCAAKEKKRSFKVFVAEGAPRYQGHLLAKELAARGLQTTVITDSAVFAMISRVNMVIVGAHAVMANGGVIAPVGLSMVALAAQRHAVPFVVLAGSHKLCPLYPHNPEVLLNELRSPSELLDFGDFSDCMDSASGGGSLHVVNPTFDYVPPKLVSLFITDTGGHNPSYMYRLIADYYSADDLVVKRRPATGI 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g02125 415 SUPERFAMILY NagB/RpiA/CoA transferase-like 7 404 IPR037171 -
Trre9g02125 415 Pfam Initiation factor 2 subunit family 19 389 IPR000649 GO:0044237
Trre9g02125 415 FunFam translation initiation factor eIF-2B subunit beta 194 400 - -
Trre9g02125 415 PANTHER TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT BETA 3 406 - -
Trre9g02125 415 MobiDBLite consensus disorder prediction 150 173 - -
Trre9g02125 415 Gene3D - 194 399 IPR042529 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g02125 Trre-Chr9 22530936 22536897 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g02125 1 407 Eukaryotic Initiation Factors Gene Family AT3G07300 80.929 0.0 633
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g02125 K03754 - gmx:100778545 723.005