Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g02076 ATGTTGATTTCGAATAGTTTGAGGAATGCGGTTTATGATTCACTTCCGTCTCTTATTCGTGGGAGGAAATGGTTGATGTTGTACAGCACATGGAAACATGGGATATCACTTTCTCTTTACCGGAGAAGCTTGCTTTGGCCTGGACCAAGTTGTTTGCTACTTTACCATTTCCTCGTTTGGAGGACTGATAGTGGTTTCAATAATGTTATCGTCAAGCGTCTTTTCATGAGCAAAGTTAACAAGCCACCACTTTCACTCTCTAGGTTGATTTGCTTCATGATGGGAAAGTTTGCACTTGAACAAGATAGAGCTTATAGGCTGATCCATGAGGCTCCTCTCCTCCCATGA 348 0.4224 MLISNSLRNAVYDSLPSLIRGRKWLMLYSTWKHGISLSLYRRSLLWPGPSCLLLYHFLVWRTDSGFNNVIVKRLFMSKVNKPPLSLSRLICFMMGKFALEQDRAYRLIHEAPLLP 115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g02076 115 Gene3D - 50 101 - -
Trre9g02076 115 PANTHER 60S RIBOSOMAL PROTEIN L18 54 95 IPR000039 GO:0003735|GO:0005840|GO:0006412
Trre9g02076 115 Pfam Ribosomal protein 60S L18 and 50S L18e 54 95 IPR021131 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g02076 Trre-Chr9 21744562 21745412 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g02076 57 96 Cytoplasmic Ribosomal Protein Gene Family AT2G47570 72.500 1.40e-12 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g02076 - - gmx:102670164 84.7297