Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g02062 ATGGAAAAACAAATCCAGAACAAACCCAGAATCCTTTGTCTCCACGGATTTAGGACCAGTGGTCAAATCCTCAAAAAACAAGTCTTACGTTGGCCTGAATCTGTAACACAAAAATTGGACCTCGTTTTCCTCGATGGTCAATTTCCAGCGCAAGGAAAATCAGATGTTGAAGCCATTTTTGATCCTCCTTATTATGAATGGTTCCAAGCCAATCAGGATTTCACCGAGTATAAGAACTTTGAAGAATGCTTATTATACATTGAAAATTATATGTTAAAAAATGGTCCTTTTGATGGTGTTCTTGGATTCTCTCAGGGTGCATTTTTAGCGGCTGCAATGCCAGGAATGCAAGAACAGGGAGTAGCATTTCAGAAGATAAACAAGATCAAACTCCTGATTCTGATATCAGGAGGTATGTTTGGTGGAATGAAGTATGGAACACCTAAACTAGCTTCCGATGCATTTTCAAAACCAATTGATTGTCCATCTCTTCACATTATAGGAGAGACAGATTTCATGAAACCAGAAAGCATTATTTTGCAAAAGGCTTTTGTTGATCCTGTTGTGATCAATCACCCAAAAGGGCATACAATACCAAGACTTGATGAAAAGAGTCTTGCAACTATGCTTGGTTTTATTGACACAATTCAGGGAATGCTATCAGATTCAGATGGTCACAGCAAGAATTGA 690 0.3826 MEKQIQNKPRILCLHGFRTSGQILKKQVLRWPESVTQKLDLVFLDGQFPAQGKSDVEAIFDPPYYEWFQANQDFTEYKNFEECLLYIENYMLKNGPFDGVLGFSQGAFLAAAMPGMQEQGVAFQKINKIKLLILISGGMFGGMKYGTPKLASDAFSKPIDCPSLHIIGETDFMKPESIILQKAFVDPVVINHPKGHTIPRLDEKSLATMLGFIDTIQGMLSDSDGHSKN 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g02062 229 FunFam esterase AGAP003155 5 220 - -
Trre9g02062 229 Pfam Serine hydrolase (FSH1) 7 203 IPR005645 -
Trre9g02062 229 SUPERFAMILY alpha/beta-Hydrolases 7 200 IPR029058 -
Trre9g02062 229 Gene3D alpha/beta hydrolase 5 218 IPR029058 -
Trre9g02062 229 PANTHER OVARIAN CANCER GENE-2 PROTEIN-RELATED 2 224 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g02062 Trre-Chr9 21180379 21182158 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g02062 6 220 Sulfurtransferasese or Rhodanese AT1G09280 31.429 6.10e-19 83.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g02062 - - tpra:123903829 434.106