Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g02052 ATGTTGACATCAATGCAAAGTTGTGTTGGCTCTTCACCTCTACTATTGCCAGTTAGAATAAATCAGCCTCAAGGGTGCGTTAAGTATTCCAGACCGAACATTGTTCGGATGCAACGCTTACCATATAACATCAGAAAAGGAGAACTTCAAATTGCAACTTCTCGAAGTTCTTCATCTCGATTCAGATGTGCTGCTGCTTTGAATGCTACATGTGCTGCTGCTGGTGCAACCCAGACTGTAACCCGCAACGCTCGGACGATGACCGTTACTCCTGACAAAGTGAGGAACCCTAGACTTGATGACAATGGGCCTGGATTGCCACCTCGCGATGATGATGGCAACGGTGGTAATGGAGGAGGAGGCGGCGGTAATTTTTCAGGTGGACTACTCCTTTTGGGTATTCTTGGTGTCCTAGACATCCTTAAAGACATAGAGGGTGAATTGCAAAACAAAGTCAAAGATTGGAAATTTCATCAAGCTTGA 483 0.4534 MLTSMQSCVGSSPLLLPVRINQPQGCVKYSRPNIVRMQRLPYNIRKGELQIATSRSSSSRFRCAAALNATCAAAGATQTVTRNARTMTVTPDKVRNPRLDDNGPGLPPRDDDGNGGNGGGGGGNFSGGLLLLGILGVLDILKDIEGELQNKVKDWKFHQA 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g02052 160 MobiDBLite consensus disorder prediction 91 120 - -
Trre9g02052 160 PANTHER PROTEIN FERTILITY RESTORER RF2, MITOCHONDRIAL 2 151 IPR040299 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g02052 Trre-Chr9 20942028 20946728 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g02052 63 147 C2H2 Transcription Factor Family AT1G56200 54.023 4.67e-07 45.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g02052 - K20726 gmx:100781669 101.679