Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g02036 ATGGCTTGTTCCTCTCTTTTTATCGTTGTCTGTTATACAATCTCAATTATTAACATTCAATTGCAACAGGTATCTGTAGTGAAACATGTAAACTTTGTTGTCAATCCTGGTGAGGTGGTTGCCATTGTTGGTCTTAGCGGTAGCGGAAAAAGCACATTGGTGAATCTTTTGCTTCGTCTCTATGAGCCTACAAGTGGTCAGGGAATTTGGTGTGGAATGATGTCAGGGACTATATTGCAAACATGTGTTCTTTTGCTAATGGTTTACAAAACTAACTGGAACAAAGAGGCCTCTCTTGCTGAAGATAGGATAAGGAATTGGGGTGGAGGTCAAGAAGTGACCGAAACCAACATAGTAGAGACATGA 366 0.4044 MACSSLFIVVCYTISIINIQLQQVSVVKHVNFVVNPGEVVAIVGLSGSGKSTLVNLLLRLYEPTSGQGIWCGMMSGTILQTCVLLLMVYKTNWNKEASLAEDRIRNWGGGQEVTETNIVET 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g02036 121 Gene3D - 8 112 IPR027417 -
Trre9g02036 121 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 23 67 IPR039421 -
Trre9g02036 121 Pfam ABC transporter 28 67 IPR003439 GO:0005524
Trre9g02036 121 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 22 82 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g02036 Trre-Chr9 20599364 20600989 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g02036 24 67 Calmodulin-binding Proteins AT2G36910 47.727 1.99e-07 46.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g02036 K03327 - tcc:18609549 86.6557