Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g02033 ATGTTACACCGATCGGAAAATTCCCTCTTCAGTGCCACCGCTTCTACTGTTCTTCGCTCGCCCGTCAAAAGATTTCTAAGTTGTTTGTCGTTCGCAAAAGAAGGTTGGCGTGACAGTGTGGGATCTGTTGAAGAAATTCAATCCAAAATATTAATGAGACAGGAGGCTGCAGCAAAACGTGAGAGAGCCATGGCATATGCTCCAACGCATCAGAATTGGATCTCAAGGACATTGAACAAAGGTACCGCAGAATGTAAACATGGAGAAACTACAACATGGCTATTTCCTGAGTCCCTTACTCTATTATTAATTGGGCCTCTCTTACAGACCTGTAGGAATCTCAATCACAATCAGCTCCAGCAAGCACTGAATGTCAACTTTCAAAAACTTTCTACCCTCTCCAAATTAGATATGTTTTTCAACTCTTTGACAGGTATCTGCAAAACAACAAGTCTAACAATAAATTCTGGAGGGGTTGCTTCCTTTGCCCTTTTCAATGTCCATGGGAGTGATGATGCATCTGTAAAAGAAGCAGCAGCTGTCATAAAGTTATCTTCATCGAGAATGGCAACACAGTCCGAATGTCTCGGATATGAATTTGCCAAGTGGTTGGGAGTCCAAACGCCACAGGCTAGAGTCATTTACAATACCAGTTCAGAATGGCTCCAAATAAAAGAAGCTGCAGAAAAAGCAAGGGATGCAGCAAGTTTTAAGCGTGATGCAATTGGTGAAACAACATGTTCAGAGCTTTTGGAAGCACTTGAGCTTAGTCGGTGTCTCTTGTTTATGAGAATGGATGAGATGATGCGTGGTCAAAGAGGATGGAGGGAGTTATCAATCTTGGGAGATAAAATGAACATGTTTAGTAGGATGATAGAAGGGTTGATTTGGTCTCCACAAAGCAACAACGGTATTAGCCGAGCTGATGATTGGGCTTTTGAGGAGGAATTTGATAAGCAAGTTCCACTGATGGATGAGATTGATACAAAGGTGAGATTCATCAATTTCTTCCTGTAA 1017 0.4189 MLHRSENSLFSATASTVLRSPVKRFLSCLSFAKEGWRDSVGSVEEIQSKILMRQEAAAKRERAMAYAPTHQNWISRTLNKGTAECKHGETTTWLFPESLTLLLIGPLLQTCRNLNHNQLQQALNVNFQKLSTLSKLDMFFNSLTGICKTTSLTINSGGVASFALFNVHGSDDASVKEAAAVIKLSSSRMATQSECLGYEFAKWLGVQTPQARVIYNTSSEWLQIKEAAEKARDAASFKRDAIGETTCSELLEALELSRCLLFMRMDEMMRGQRGWRELSILGDKMNMFSRMIEGLIWSPQSNNGISRADDWAFEEEFDKQVPLMDEIDTKVRFINFFL 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g02033 338 PANTHER DUAL SPECIFICITY PROTEIN PHOSPHATASE PHS1 146 264 IPR035010 GO:0004721|GO:0009737|GO:0043622
Trre9g02033 338 Pfam Actin-fragmin kinase, catalytic 122 283 IPR015275 -
Trre9g02033 338 SUPERFAMILY Protein kinase-like (PK-like) 123 265 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g02033 Trre-Chr9 20475598 20480958 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g02033 148 263 Protein tyrosine phosphatase (PTP) family AT5G23720 68.103 3.12e-43 157
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g02033 K14165 - jre:109000311 163.31