Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g02008 ATGGCAAGGTTCATACTTGTGACCGTTTTGTTTTTCAACTTGGTCATTGTTCCTTCAATAGCTTTTCCATTTGGAAATGGATATGGTTTTGATAAACCAAAAGAAGGTAATAATAACTATGATGATAAACCAAAAGAAGATAATAATAATAATAATAACTATGATGATAAACCAAAGGAAAAACCAAATGATGTTGTTAATGATAATAAAAATGTTGGTAATCTTAAGCAAGGATTCTATAGCGGTAGTTGCCCCAATGCGGAGAAAATTGTGGCGGATGCTCTTGCAGAGATCGTTAAAATGAATCCAAATGCAGTTGCTAACCTCCTTCGTCTTCAATTTCATGACTGCTTCGTTGTTGGATGTGATGCATCAATCTTGCTAGACTACTCACCAACAGGAGAACAAGTAGAAAAAAGTTCATTTTTCAATGGTCAACTTCTCAAAGGAGCTGATATAGTTGATGATATAAAATCAAAGCTAGAAGAACAATGTCCAGGAGTAGTATCATGCTCGGACACATTAGCATTCGCAATCAACGAAGGAATGGTCCTTGCAGGTTTACCTCGTAGAGCGCCTCTCGGTGGTCGTAGAGATTCGGTCTATTCCCTCGCATCCGTTGTGGAAAACAACAACCTTCCAATGCCTGGTTGGCCAATCGAAAGAATGGTTGAACTCTTTACCAGAAAAGGTTTCACAATCGAAGAAATGGTTATTTTAATTGGTGCACATTCAGTTGGTTCGGTTCATTGTGATATTTTTATGGAAAGGATTTACAATTTCGCAAATACAAGAAAACCTGACCCTACACTACCGGCTCCAGTAATTAATGAGTTTCAACAGGTATGTAAGAATGCTGGGACACCTCAATTTAGAAACCCACCGGTGAATTTCGATGAGACACCGACGGTGCTTGATACCTTGTTTTTCAAGAATATGGTGAATAGAAACAAGACAACTATTCTTACAGATTCTCATTTGATCAATGATCCTAGAACAATTCCTATTGTTCAACAGATGGCCAATGAGGATGGTTTGTGGCAACAAAGGTTTCCTGAGGTTATGGATAAAATGAGTTCTTTGAATGTTCTTACCGGAAATAATGGTGAAGTGAGGAAGACTTGTAGGTCCACTAATTAA 1140 0.3781 MARFILVTVLFFNLVIVPSIAFPFGNGYGFDKPKEGNNNYDDKPKEDNNNNNNYDDKPKEKPNDVVNDNKNVGNLKQGFYSGSCPNAEKIVADALAEIVKMNPNAVANLLRLQFHDCFVVGCDASILLDYSPTGEQVEKSSFFNGQLLKGADIVDDIKSKLEEQCPGVVSCSDTLAFAINEGMVLAGLPRRAPLGGRRDSVYSLASVVENNNLPMPGWPIERMVELFTRKGFTIEEMVILIGAHSVGSVHCDIFMERIYNFANTRKPDPTLPAPVINEFQQVCKNAGTPQFRNPPVNFDETPTVLDTLFFKNMVNRNKTTILTDSHLINDPRTIPIVQQMANEDGLWQQRFPEVMDKMSSLNVLTGNNGEVRKTCRSTN 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g02008 379 Pfam Peroxidase 92 342 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre9g02008 379 FunFam Peroxidase 78 216 - -
Trre9g02008 379 CDD secretory_peroxidase 74 378 IPR033905 GO:0004601|GO:0042744
Trre9g02008 379 SUPERFAMILY Heme-dependent peroxidases 75 379 IPR010255 GO:0004601|GO:0006979|GO:0020037
Trre9g02008 379 Gene3D Peroxidase, domain 2 214 358 - -
Trre9g02008 379 PANTHER - 73 379 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre9g02008 379 ProSiteProfiles Plant heme peroxidase family profile. 74 379 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre9g02008 379 MobiDBLite consensus disorder prediction 35 66 - -
Trre9g02008 379 PRINTS Haem peroxidase superfamily signature 106 120 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre9g02008 379 PRINTS Haem peroxidase superfamily signature 236 251 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre9g02008 379 PRINTS Haem peroxidase superfamily signature 187 199 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre9g02008 379 PRINTS Haem peroxidase superfamily signature 169 186 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre9g02008 379 PRINTS Haem peroxidase superfamily signature 298 313 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre9g02008 379 PRINTS Plant peroxidase signature 108 128 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre9g02008 379 PRINTS Plant peroxidase signature 187 202 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre9g02008 379 PRINTS Plant peroxidase signature 168 178 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre9g02008 379 PRINTS Plant peroxidase signature 313 330 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre9g02008 379 PRINTS Plant peroxidase signature 235 247 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre9g02008 379 PRINTS Plant peroxidase signature 84 103 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre9g02008 379 PRINTS Plant peroxidase signature 353 366 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre9g02008 379 PRINTS Plant peroxidase signature 149 162 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre9g02008 379 MobiDBLite consensus disorder prediction 33 68 - -
Trre9g02008 379 FunFam Peroxidase 214 358 - -
Trre9g02008 379 ProSitePatterns Peroxidases active site signature. 106 117 IPR019794 GO:0004601
Trre9g02008 379 ProSitePatterns Peroxidases proximal heme-ligand signature. 236 246 IPR019793 -
Trre9g02008 379 Gene3D - 79 379 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g02008 Trre-Chr9 20165960 20167325 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g02008 73 379 Peroxidase AT5G17820 37.621 1.11e-65 211
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g02008 K00430 - gmx:100802856 429.483