Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g02007 ATGAAAATGGCAAGGTTCATACTTGTGACCGTTTTGTTTTTCAACTTGGTCATTGTTCCTTCAATAGCTTTTCCATTTGGAAATGGATATGGTTTTGATAAACCAAAAGAAGGTAATAATAACTATGATGATAAACCAAAAGAAGATAATAATAATAATAATAACTATGATGATAAACCAAAGGAAAAACCAAATGATGTTGTTAATGATAATAAAAATGTTGGTAATCTTAAGCAAGGATTCTATAGCGGTAGTTGCCCCAATGCGGAGAAAATTGTGGCGGATGCTCTTGCAGAGATCGTTAAAATGAATCCAAATGCAGTTGCTAACCTCCTTCGTCTTCAATTTCATGACTGCTTCGTTGTTGGATGTGATGCATCAATCTTGCTAGACTACTCACCAACAGGAGAACAAGTAGAAAAAAGTTCATTTTTCAATGGTCAACTTCTCAAAGGAGCTGATATAGTTGATGATATAAAATCAAAGCTAGAAGAACAATGTCCAGGAGTAGTATCATGCTCGGACACATTAGCATTCGCAATCAACGAAGGAATGGTCCTTGCAGGTTTACCTCGTAGAGCGCCTCTCGGTGGTCGTAGAGATTCGGTCTATTCCCTCGCATCCGTTGTGGAAAACAACAACCTTCCAATGCCTGGTTGGCCAATCGAAAGAATGGTTGAACTCTTTACCAGAAAAGGTTTCACAATCGAAGAAATGGTTATTTTAATTGGTGCACATTCAGTTGGTTCGGTTCATTGTGATATTTTTATGGAAAGGATTTACAATTTCGCAAATACAAGAAAACCTGACCCTACACTACCGGCTCCAGTAATTAATGAGTTTCAACAGGTATGTAAGAATGCTGGGACACCTCAATTTAGAAACCCACCGGTGAATTTCGATGAGACACCGACGGTGCTTGATACCTTGTTTTTCAAGAATATGGTGAATAGAAACAAGACAACTATTCTTACAGATTCTCATTTGATCAATGATCCTAGAACAATTCCTATTGTTCAACAGATGGCCAATGAGGATGGTTTGTGGCAACAAAGGTTTCCTGAGGTTATGGATAAAATGAGTTCTTTGAATGTTCTTACCGGAAATAATGGTGAAGTGAGGAAGACTTGTAGGTCCACTAATTAA 1146 0.377 MKMARFILVTVLFFNLVIVPSIAFPFGNGYGFDKPKEGNNNYDDKPKEDNNNNNNYDDKPKEKPNDVVNDNKNVGNLKQGFYSGSCPNAEKIVADALAEIVKMNPNAVANLLRLQFHDCFVVGCDASILLDYSPTGEQVEKSSFFNGQLLKGADIVDDIKSKLEEQCPGVVSCSDTLAFAINEGMVLAGLPRRAPLGGRRDSVYSLASVVENNNLPMPGWPIERMVELFTRKGFTIEEMVILIGAHSVGSVHCDIFMERIYNFANTRKPDPTLPAPVINEFQQVCKNAGTPQFRNPPVNFDETPTVLDTLFFKNMVNRNKTTILTDSHLINDPRTIPIVQQMANEDGLWQQRFPEVMDKMSSLNVLTGNNGEVRKTCRSTN 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g02007 381 MobiDBLite consensus disorder prediction 37 68 - -
Trre9g02007 381 MobiDBLite consensus disorder prediction 35 70 - -
Trre9g02007 381 ProSitePatterns Peroxidases active site signature. 108 119 IPR019794 GO:0004601
Trre9g02007 381 PRINTS Haem peroxidase superfamily signature 300 315 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre9g02007 381 PRINTS Haem peroxidase superfamily signature 171 188 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre9g02007 381 PRINTS Haem peroxidase superfamily signature 238 253 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre9g02007 381 PRINTS Haem peroxidase superfamily signature 108 122 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre9g02007 381 PRINTS Haem peroxidase superfamily signature 189 201 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre9g02007 381 PRINTS Plant peroxidase signature 86 105 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre9g02007 381 PRINTS Plant peroxidase signature 355 368 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre9g02007 381 PRINTS Plant peroxidase signature 170 180 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre9g02007 381 PRINTS Plant peroxidase signature 189 204 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre9g02007 381 PRINTS Plant peroxidase signature 237 249 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre9g02007 381 PRINTS Plant peroxidase signature 151 164 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre9g02007 381 PRINTS Plant peroxidase signature 315 332 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre9g02007 381 PRINTS Plant peroxidase signature 110 130 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre9g02007 381 Gene3D Peroxidase, domain 2 216 360 - -
Trre9g02007 381 PANTHER - 75 381 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre9g02007 381 Gene3D - 81 381 - -
Trre9g02007 381 FunFam Peroxidase 80 218 - -
Trre9g02007 381 ProSiteProfiles Plant heme peroxidase family profile. 76 381 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre9g02007 381 FunFam Peroxidase 216 360 - -
Trre9g02007 381 Pfam Peroxidase 94 344 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre9g02007 381 CDD secretory_peroxidase 76 380 IPR033905 GO:0004601|GO:0042744
Trre9g02007 381 ProSitePatterns Peroxidases proximal heme-ligand signature. 238 248 IPR019793 -
Trre9g02007 381 SUPERFAMILY Heme-dependent peroxidases 77 381 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g02007 Trre-Chr9 20165954 20167325 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g02007 75 381 Peroxidase AT5G17820 37.299 1.01e-65 211
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g02007 K00430 - gmx:100802856 433.335