Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g01967 ATGGCAACAACACAACCTGAATTTGAACATCCTAACAAGGCCTTTGGTTTGGCAGCTAGAGACCCTTCTGGTCTTCTCTCCCCTTTCAATTTCTCTAGAAGGGAAACCGGTGAAAAAGATGTTGCATTTAAAGTATTGTATTGTGGAATATGTCACTCTGATCTCCACATGGTGAAAAATGAATGGGGAATGTCAACCTATCCATTAGTTCCTGGGCATGAGATTGCTGGTATTGTGACAGAGGTGGGAAGCAAGGTACAAAAGTTCAAAGTTGGAGACAGTGGGTGTAGGCTGCATGGTTGA 303 0.4323 MATTQPEFEHPNKAFGLAARDPSGLLSPFNFSRRETGEKDVAFKVLYCGICHSDLHMVKNEWGMSTYPLVPGHEIAGIVTEVGSKVQKFKVGDSGCRLHG 100
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g01967 100 Gene3D - 18 94 - -
Trre9g01967 100 PANTHER ALDEHYDE REDUCTASE 6 94 IPR047109 GO:0016616
Trre9g01967 100 Pfam Alcohol dehydrogenase GroES-like domain 39 94 IPR013154 -
Trre9g01967 100 SUPERFAMILY GroES-like 10 93 IPR011032 -
Trre9g01967 100 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 72 86 IPR002328 GO:0008270|GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g01967 Trre-Chr9 19325719 19326653 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g01967 13 96 Monolignol Biosynthesis Gene Families AT4G37990 79.310 6.38e-46 149
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g01967 K23232 - gmx:100809071 172.555