Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g01933 ATGTACAGAAGACACCATAAACCTGATTGTTTATGTGCATTTTGTGTGCTAAAGCACCGTAGGAAGGAACGGGAGGAGAATGATCGAATTGCAAAAGGAAAATTTGTGTCTGGTGGTTATAAGCATGCTAGAGAGTTCAAGCAAGAGGGTTTGGTTATGATGCTTTATTTCATTTCAAGCTTTTCAGAGAAAAGCTCTTCAACATGCCTTCCTTTATGGGGGTTCCTTGTGGATTTTATGTCCCATGTTGCAATTGTGGGATTTGTAGCAGGAGCTGCAATTGTGATTGGCCTTCAACAATTGAAGGGACTGTTTGGAATCACTCGTTTTACCACCAAAACAGACATAATCTGTTTCATGAAAGCTGTTTGGGAAGCATTTCATAATCCTTTCCACCTTTGGCGTCCCTATGGCCATATGATTATCCTATTTCAACAAAACTTTTATGATGCATGA 456 0.3969 MYRRHHKPDCLCAFCVLKHRRKEREENDRIAKGKFVSGGYKHAREFKQEGLVMMLYFISSFSEKSSSTCLPLWGFLVDFMSHVAIVGFVAGAAIVIGLQQLKGLFGITRFTTKTDIICFMKAVWEAFHNPFHLWRPYGHMIILFQQNFYDA 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g01933 151 PANTHER SULFATE TRANSPORTER 73 130 IPR001902 GO:0016020|GO:0055085
Trre9g01933 151 Pfam Sulfate permease family 74 132 IPR011547 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g01933 Trre-Chr9 18883494 18885657 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g01933 74 141 Inorganic Solute Cotransporters AT1G77990 60.294 2.07e-22 90.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g01933 K17469 - gmx:100817831 98.2117