Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g01883 ATGGCAATTGAAAACCAAGACAACACTACCACTGTCAGAGAAATCAAGCCTAAAAATAGAAGAATCATGGGTGCTGGAGGTCCTGATGATGATGGTGATAACAGATGGCCACCATGGCTGAAACCTTTGTTGAAAGAGAATTTCTTTGTTCAATGCAAATTACATGCTGATTCTCACAAGAGTGAATGTAATATGTATTGTTTGGATTGTATGAACGGTGCTCTTTGTTCTCTTTGTCTTGCTTATCACAAAGATCACAGTTTTATTCAGATTAGGAGATCTTCATATCATGATGTGATTAGGGTGAATGAGATTCAGAAAGTGTTGGACATAACTGGTGTTCAAACATACATTATCAATAGTGCAAGAGTTGTGTTTTTGAATGAAAGACCTCAACCTAGGCCAGGAAAAGGTGTCACAAACACTTGTGAAGTTTGTGAAAGGAGCCTTCTTGATTCTTTCCGGTTCTGTTCTCTTGGTTGCAAGATTGTAGGAACATCTAAGAATTTCAAGAAAACAAAGAAACAATTAGCAGTAATGGCATCAGATTCTGAGGATTCATACAGCAGCAACAATATTCATAGCCGTCAGAAGAAAATCAAAGTTCAAAGCTTCTCACCATCAACACCACCTCCAACTTCAGTTAATTACAAAACAGCCAAAAGAAGAAAGGGAATACCACATAGAGCCCCATTGGGGGTATTTTTAGATAATTGGTATTTTTAA 726 0.3733 MAIENQDNTTTVREIKPKNRRIMGAGGPDDDGDNRWPPWLKPLLKENFFVQCKLHADSHKSECNMYCLDCMNGALCSLCLAYHKDHSFIQIRRSSYHDVIRVNEIQKVLDITGVQTYIINSARVVFLNERPQPRPGKGVTNTCEVCERSLLDSFRFCSLGCKIVGTSKNFKKTKKQLAVMASDSEDSYSSNNIHSRQKKIKVQSFSPSTPPPTSVNYKTAKRRKGIPHRAPLGVFLDNWYF 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g01883 241 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 31 232 - -
Trre9g01883 241 MobiDBLite consensus disorder prediction 188 218 - -
Trre9g01883 241 Pfam PLATZ transcription factor 92 163 IPR006734 -
Trre9g01883 241 CDD Bbox2 52 91 - -
Trre9g01883 241 MobiDBLite consensus disorder prediction 188 216 - -
Trre9g01883 241 MobiDBLite consensus disorder prediction 11 28 - -
Trre9g01883 241 MobiDBLite consensus disorder prediction 1 34 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g01883 Trre-Chr9 18082535 18084397 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Trre9g01883 PLATZ 4.3e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g01883 - - gmx:100791221 426.402
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre9g01883 9 18082535 18084397 Trre9g01883 9 18082535 18084397 ECH
Trre9g01883 9 18082535 18084397 Trre15g01986 15 16053263 16055277 PCT