Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g01866 ATGGATCTTCAAACACTTTACCCTTTCGCCCTATTTTCCATTTTCCTATTCTCCATCGTTGTTAGACAAAAACTAAGGAAAATCAAGAAAATTGACTCAACTCAAAATATACCCCCAGGGCCATGGAAGCTACCTATCATAGGAAACATAGCCAATCTTATTGGCTCTTCACCACATACAAAATTAAGAGATTTGGCAAAACAATATGGACCTTTAATGCATCTTCAACTTGGTGAAGTCTTTGTTATTATTGTTTCCTCTGCAGAATATGCTATGGAAATAATGAAAACACATGATGTTATATTTGCATCAAGGCCTCAAACACTAACCTCGGAGATAATATTTTATGATTCAAATGATATAGCTTTTGCACCTTATGGCGAACATTGGAGACAACTTAGAAAGATTTGTACCATGGAACTTTTAAGTGTAAAATGCGTTCAATCTCTTTGGCCAATCAGAGAACAAGAGATTAATAATCTCGTCAAAAGGATTGCTTCAGAAGAAGGAAGAGTCATCGATCTTTCTCAAAAAGTTGTGTCATTGATGTATTCGATCACATCAATGGCTGCATTTGGTAAGAAATACATGGAGCAAGATGAGTTCATATCCGAGGTAACAGAAGTATCAAACGCAGCCAGTGGTTTCCACCTTGTAGACTTGTTTCCTTCGGCGAAATGGCTTGAAAATGTTACTGGAATGAGGCCTAAGCTCGAGAAGTTACATAAAAAACTTGATAGAATACTTGATATAATCATCAATGATCATAAAGAGACAAAGTCGAGAACTAAAGATTGTTTAGTTGAAGGAGAGGAAGATTTTATTGATGTTCTCTTAAAGTTGGAGGATGGTAGCAGCAGTGATCAGGATTCTTGCTTAACTAAGAGAAATATGAAGGCTATAATCTTTGACATGTTTCTTGCTGGAAGTGACCAACCAGCAACCACAATTATTTGGGCTATGGCCGAAATAATAAAGAATCCAAGAGTAGCGAAGAAAGCACAAGCTGAAGTGAGAGACATATTCACAAAAAGAGGAAAAATTGATGAAAAAAGCATTGATGAGTTAAAATACATGAAAGCAATCATCAAAGAGGTTCTAAGAATGCATCCTTCTTCTCCTCTTTTATTACCAAGGGAATCCGGACAAGCTTGCGAGATTGATGGTTATCACATACCAATCAAAAGTAAGGTGATAATCAATGCTTGGGCGATTGGAATGGATCCAAAATATTGGATAGAGCCAGAAAGGTTTTATCCTGAAAGGTTTATTGATAGTTCTATTAATTTTAAAGGAACTAATTTTGAGTATATTCCGTTTGGTGCTGGAAGGAGAATTTGTCCGGGCATTGATTTTGGTATTGCAAATGTTGAACTAGTTCTCGCCTTATTGTTGTGTTACTTTGATTGGAAACTTCCTAACGAAATGAAAAGTGAGGATTTAGATATGACTGAAGTATTTGGAGCAAATGTTAAAAGAAAAAATAACTTATGCTTGATTCCAATCACTTATCCTTCATTTAGATATGACTGA 1533 0.3568 MDLQTLYPFALFSIFLFSIVVRQKLRKIKKIDSTQNIPPGPWKLPIIGNIANLIGSSPHTKLRDLAKQYGPLMHLQLGEVFVIIVSSAEYAMEIMKTHDVIFASRPQTLTSEIIFYDSNDIAFAPYGEHWRQLRKICTMELLSVKCVQSLWPIREQEINNLVKRIASEEGRVIDLSQKVVSLMYSITSMAAFGKKYMEQDEFISEVTEVSNAASGFHLVDLFPSAKWLENVTGMRPKLEKLHKKLDRILDIIINDHKETKSRTKDCLVEGEEDFIDVLLKLEDGSSSDQDSCLTKRNMKAIIFDMFLAGSDQPATTIIWAMAEIIKNPRVAKKAQAEVRDIFTKRGKIDEKSIDELKYMKAIIKEVLRMHPSSPLLLPRESGQACEIDGYHIPIKSKVIINAWAIGMDPKYWIEPERFYPERFIDSSINFKGTNFEYIPFGAGRRICPGIDFGIANVELVLALLLCYFDWKLPNEMKSEDLDMTEVFGANVKRKNNLCLIPITYPSFRYD 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g01866 510 FunFam Cytochrome P450 71D8 30 501 - -
Trre9g01866 510 SUPERFAMILY Cytochrome P450 38 500 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g01866 510 PRINTS E-class P450 group I signature 297 314 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g01866 510 PRINTS E-class P450 group I signature 447 470 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g01866 510 PRINTS E-class P450 group I signature 401 425 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g01866 510 PRINTS E-class P450 group I signature 317 343 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g01866 510 PRINTS E-class P450 group I signature 437 447 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g01866 510 PRINTS E-class P450 group I signature 182 200 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g01866 510 PRINTS E-class P450 group I signature 90 111 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g01866 510 PRINTS E-class P450 group I signature 66 85 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g01866 510 PRINTS E-class P450 group I signature 360 378 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g01866 510 PRINTS P450 superfamily signature 361 372 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g01866 510 PRINTS P450 superfamily signature 308 325 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g01866 510 PRINTS P450 superfamily signature 438 447 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g01866 510 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 440 449 IPR017972 GO:0005506|GO:0016705
Trre9g01866 510 Gene3D Cytochrome P450 30 499 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g01866 510 CDD CYP71-like 68 497 - -
Trre9g01866 510 PANTHER OS08G0105600 PROTEIN 61 503 - -
Trre9g01866 510 Pfam Cytochrome P450 38 488 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g01866 Trre-Chr9 17832103 17834301 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g01866 6 501 Cytochrome P450 AT3G26310 39.165 1.62e-128 382
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g01866 - - gmx:102665189 646.351