Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g01851 ATGGAAAATGGAGATATGGAGTTTGCAACTGAAGTGAAAAAGGAAGATCAGGTCTCATCTCATCAAAGAGTTGGAGCGATCAGAGATTTTCCACATTTATGTGGACGCAATGCTCGTATGAAAGTTGAATTTTATGCCCGGCTAGACAGGTCTAAAACTGCTGTCAAGACGAAACATGTACTGAATCATTCTGAGCACGTGCAGTTGAAAAAGAAATCTAATTCTGATGACATGGCTGAATTAGTAAGACGGGAGAATAATTCTCTAGACCCTAATAAAAAAAGCAATAACTTTCAAAGCGTCCCAAAATCACATGGTGTAAATGTTCCTCCTCTTGGTCATGAGAATGACCCAATGGCCCGGAATAAAGTGAGGAATGCATTACGCCTGTTCCAAGCTGTTTCTAGAAATCTTTTGCAGGAAGCAAAAGCAAAGTCAAACGAGAAAGAAAGAATGAGGTTTGATTTACAAGCTGCGAAAATACTTAAGGAGAAAGGGAACTATGTTAATGTAGGGGATAAGATCTTGGGATCTGTCCCCGGGATTGAAGTCGGTGATAAATTTCAATACAGAATAGAGCTTAATATAATTGGCCTTCATCGCCAGATTCAGGGTGGTATAGATTATGTGAAGATATATGTTTATGAATTATGA 654 0.3869 MENGDMEFATEVKKEDQVSSHQRVGAIRDFPHLCGRNARMKVEFYARLDRSKTAVKTKHVLNHSEHVQLKKKSNSDDMAELVRRENNSLDPNKKSNNFQSVPKSHGVNVPPLGHENDPMARNKVRNALRLFQAVSRNLLQEAKAKSNEKERMRFDLQAAKILKEKGNYVNVGDKILGSVPGIEVGDKFQYRIELNIIGLHRQIQGGIDYVKIYVYEL 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g01851 217 Pfam SAD/SRA domain 176 211 IPR003105 -
Trre9g01851 217 MobiDBLite consensus disorder prediction 84 115 - -
Trre9g01851 217 ProSiteProfiles YDG domain profile. 177 217 IPR003105 -
Trre9g01851 217 Gene3D - 158 214 IPR036987 -
Trre9g01851 217 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 42 210 - -
Trre9g01851 217 SUPERFAMILY PUA domain-like 165 212 IPR015947 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g01851 Trre-Chr9 17666928 17667581 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g01851 124 210 Su(var)3-9 homologs AT1G73100 41.379 5.98e-10 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g01851 K11420 - tpra:123908193 266.159