Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g01850 ATGGGTGGAGCATTTGTTGTCATATTTTACAAGGGTCCACCAATCATCAAAATACATTCATTGAACAACACACTTCAATTTTCACCAAATTTGAATTGGATTTTGGGAGGGTTGTTATGTGCTGGAGATTCTTTAGCTTCATCAATATGGTACATATATCAGGTTTCAGTAACAAAGAAATACCCAGCTGTAATAGTGATAGTCTTCTTCCAAGTATTTTTTATTGCAATTCAATCAGGAATATTTGCCTTAATTGTGGTTAGAGATCCAAGTGCATGGGAACTAAAGCTTGATATGGGATTGGTTGCCATTATTTATCAGCTTTCAAGATTTATGAGTTCGATTTTTGTTGGGTTCACGGCAATAGGGGCAATAGGGATTCGGTATCTACTACAAACATGGTGCGTACAAAAAGCTGGTCCTCTGTTTTGTGCTATGTTCAAGCCTGTCGGAATCATCTTCACTGTTTTATTGGGTTCAATTTTTCTAGGAGATGACTTCTATCTTGGAAGTTTGATTGGTGCGGTAATAATCGTGGTAGGATTTTATGCTGTGCAATGGGGGAAAGCATCAGAAGAGAAAAGGATTCAAAACTTGGAGACATCGTGCAATGTTGCTCCACTATTACAAAACAAAGCATAA 642 0.3738 MGGAFVVIFYKGPPIIKIHSLNNTLQFSPNLNWILGGLLCAGDSLASSIWYIYQVSVTKKYPAVIVIVFFQVFFIAIQSGIFALIVVRDPSAWELKLDMGLVAIIYQLSRFMSSIFVGFTAIGAIGIRYLLQTWCVQKAGPLFCAMFKPVGIIFTVLLGSIFLGDDFYLGSLIGAVIIVVGFYAVQWGKASEEKRIQNLETSCNVAPLLQNKA 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g01850 213 PANTHER WAT1-RELATED PROTEIN 2 197 IPR030184 GO:0016020|GO:0022857
Trre9g01850 213 SUPERFAMILY Multidrug resistance efflux transporter EmrE 107 190 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g01850 Trre-Chr9 17649097 17665565 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g01850 3 212 Nodulin-like Gene Family AT3G28070 35.780 5.71e-38 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g01850 - - tpra:123906754 350.903