Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g01849 ATGGTGGGATGGCTAAACATGAATGGTACAAACAAATTACTACCATTTGTGGGAATGATTATAGCTGTTTTAGCACAAAGTGGAAGCATGGTGGTAATTAAAGTTGCAATGAAAGATGGAATGAACAAATATGTAATGGTTGTGTATTCCATGTCACTTTCCACCATCTTGCTTCTTCCCTTAGCCTTTTTTATCAACAGGTCAGAGCGTCCTCCTCTAACTTTCTCTGCACTTTGCAGCTTCTTTTTGCTTGCTCTCATGGGAACTTCAGGACAGATAATGACTTATGGTGGCATAGAACTCAGCTCACCCACTCTTGCATCAGCAATGCTTAACCTCATTCCAGCTTTCACTTTCGTACTTGCTCTCCTTTTCAGATGTCACAAAACATTAGGCATGTCACCAAAAAATATTCTTAGAGTTAGAGATGTCACCAAACAAGGCATGTCACCCAAAACATTAATGCAATTTCACCTAAGTTTCAAGTTAATTAATACATGA 501 0.3872 MVGWLNMNGTNKLLPFVGMIIAVLAQSGSMVVIKVAMKDGMNKYVMVVYSMSLSTILLLPLAFFINRSERPPLTFSALCSFFLLALMGTSGQIMTYGGIELSSPTLASAMLNLIPAFTFVLALLFRCHKTLGMSPKNILRVRDVTKQGMSPKTLMQFHLSFKLINT 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g01849 166 Pfam EamA-like transporter family 18 125 IPR000620 GO:0016020
Trre9g01849 166 PANTHER WAT1-RELATED PROTEIN 14 133 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g01849 Trre-Chr9 17608103 17611167 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g01849 11 133 Nodulin-like Gene Family AT1G09380 37.097 6.58e-23 91.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g01849 - - gmx:100816194 181.8