Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g01845 ATGACATTGGTTATCAGAGAAAGGAGACAAAGGCAAGCTCTAAGGCTTTCTTTACCAAAACCTCAAATTTCATCTTCTTCTCATAATTTCCCTAACCAAACACAAATGCCATCACTGATTTCATCACCATCCTCTCATGGAATCAGCAGCCTCTCAGACCTTGAAAAAGTAACAGTACTTGGCCATGGTAACGGTGGAATAGTCTATAAAGTTCATCACAAGAAGAATAATTCATTTTATGCATTGAAAGTTTTAAATTTTGATCGAAATGGTATTGGATTTCGACAACCACCAACACTAGAAGCTGAGATTCTCAAAAGGGTTGTTGATTCACCTTATATTGTAAGGTGTCATGCAGTTTTTTACAATCATGCATATGTAACACCGACACTTCAGACTAAAGGCGTGTCTGGTGACCTTAGTTTTGTTATGGAATATATGGAAGGAGGGTCATTGTATGATATCTTGCAACAACATCATAGGCTTCCTGAGGAAGTGATTTGTGTTTTGGCTAAGAGTGTTTTGGAAGGGCTAAATTATTTGCATGGTATGAACATTGTTCATAGAGATATTAAACCTTCAAATTTGCTTGTGAATGAAAAAGGGGAGGTGAAAATAGCAGATTTTGGTGTTAGTCATGTAGTAGAAGGTAGATTTGAAGCAAATGATATGAATGCAGGTACATGTGCATATATGAGTCCAGAAAGATTTGATCTTGAAAGATGGGGTGGTGAAAATGTTGATGAATTTGTTGGTGATGTTTGGTCATTAGGTGTTGTAATGTTGGAATGTCTTTTGGATCATTTTCCTTTGATTGGTCCTCAACAGAGACCTGACTGGGCTACTTTGATGTGTGCAATTTGTTTTGGTGAGAGGCTTGAGATGCCAGAGAAAGCTTCAAAAGAGTTTCAAAGTTTTGTTAGAAGGTGTCTTGAGAAGGATTGGAGGAAGAAATTTTGA 960 0.3719 MTLVIRERRQRQALRLSLPKPQISSSSHNFPNQTQMPSLISSPSSHGISSLSDLEKVTVLGHGNGGIVYKVHHKKNNSFYALKVLNFDRNGIGFRQPPTLEAEILKRVVDSPYIVRCHAVFYNHAYVTPTLQTKGVSGDLSFVMEYMEGGSLYDILQQHHRLPEEVICVLAKSVLEGLNYLHGMNIVHRDIKPSNLLVNEKGEVKIADFGVSHVVEGRFEANDMNAGTCAYMSPERFDLERWGGENVDEFVGDVWSLGVVMLECLLDHFPLIGPQQRPDWATLMCAICFGERLEMPEKASKEFQSFVRRCLEKDWRKKF 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g01845 319 MobiDBLite consensus disorder prediction 18 44 - -
Trre9g01845 319 ProSitePatterns Serine/Threonine protein kinases active-site signature. 186 198 IPR008271 GO:0004672|GO:0006468
Trre9g01845 319 PANTHER MITOGEN-ACTIVATED KINASE KINASE KINASE 26 317 - -
Trre9g01845 319 Pfam Protein kinase domain 55 317 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre9g01845 319 ProSiteProfiles Protein kinase domain profile. 54 319 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre9g01845 319 ProSitePatterns Protein kinases ATP-binding region signature. 60 83 IPR017441 GO:0005524
Trre9g01845 319 SMART serkin_6 54 319 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre9g01845 319 Gene3D Phosphorylase Kinase; domain 1 22 147 - -
Trre9g01845 319 Gene3D Transferase(Phosphotransferase) domain 1 148 319 - -
Trre9g01845 319 SUPERFAMILY Protein kinase-like (PK-like) 29 318 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g01845 Trre-Chr9 17547335 17548294 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g01845 1 318 MAP Kinase Kinase Gene Family AT1G32320 48.428 2.16e-94 280
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE7 Trre9g01845 Pkinase 5.5e-53 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g01845 K20604 - gmx:100817973 449.899