Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g01812 ATGGAAAACTACAGGGATGTTATTCATTCAACTGACAGCGATTCATTGGATGCATCTAGTGGTGAACACAGTGATGATGCTGGATATAGTGATGATGAAGATTGTAACTATGATGTATCCGATGAAGACCAAAGTTCAAATGATGAAGATGTTGCTGATAATTACGATGGCTCTGAAGCAATTGAATCGAAAGAGCCAAATCAGGAAGTACTTGTGGGTGAACATATGGTAAGGATTAATTCCCTTACTGCTGAGGAAATTCGTGGTTTGGAATTTGGAAATTGCGATGAAGCATATGAATTTTACTATCAATACGCTAAATGTAAAGGATTTGCTATCAGGAGAAGCGATATGAAAAGAAAGCCCAAAGGTACTGGAATGATAGTAATGAATCTGTTTGTCTGCAACAAACGTGGATTAAGAGAAGAGAAGCACTTAAATAGGGTAGATAGGCAAAGACGTGACCAACGTCTGAGCCGTACCAACTGCACTGCTAGGATCCGTGTGCACTCTGGCTTTATGATTATAATTTATGGAACCAAGTCAAGTATCGGACTTCATGGATGGGGAGTTCGTGAGTACCCAAGGCGCGTCTATGACGCCGTGTTGTTTAGTAATGAGTTGGAAATTCTCACCTTGCGTTGGAAAGAATTAAATAGGGAACAATTCAAATTTATCGAGCCCCGATTAACTTATGGGACTATTGGTGGGAGATTTAAGAAAGGAGAAAACCCGTTTATTGAAGAGGCATATCAACGTGTAGCGTTAGATCAGCTTCTTAAGATTGCTGGTATTACAGATGACGACTTATTGATTATGTCTGATGTTGATGAGATACCGAGTGCTCACACTATTAACCTCTTGAGATGGTGCGACAAAATACCTCCAATCTTGCATCTACAGCTAAAGAATTATCTATATTCATTCGAGTTTCATCTGGATAACAAGAGCTGGAGAGCAGCAATTCACAGGTATCAGTCCGACAAGACAAGATATGCACATTATCGCCAGTCCGATAACATATTGGCAGATTCGGGTTGGCATTGTAGCTTTTGTTTCCGACGAATCAGTGATTTTATTTTTAAGATGAAAGCTTACAGTCATTACGATAGAGTTAGGTTCTCTCACTTTTTAAATCCTGATAGAATTCAGAAAGTAATATGTGAAGGGGCTGATCTATTTGATATGCTCCCTGAGGAGTATACTTTTAGGGAGATCATTGGTAAAATGGGTCCAATACCTCGTTCATATTCTGCAGTTCACCTTCCTGCTTTCCTTTTAGAAAATGCAGAAAAGTATAAATTTCTCTTGCCTGGAAATTGCATGAGAGAGAGATGA 1338 0.3924 MENYRDVIHSTDSDSLDASSGEHSDDAGYSDDEDCNYDVSDEDQSSNDEDVADNYDGSEAIESKEPNQEVLVGEHMVRINSLTAEEIRGLEFGNCDEAYEFYYQYAKCKGFAIRRSDMKRKPKGTGMIVMNLFVCNKRGLREEKHLNRVDRQRRDQRLSRTNCTARIRVHSGFMIIIYGTKSSIGLHGWGVREYPRRVYDAVLFSNELEILTLRWKELNREQFKFIEPRLTYGTIGGRFKKGENPFIEEAYQRVALDQLLKIAGITDDDLLIMSDVDEIPSAHTINLLRWCDKIPPILHLQLKNYLYSFEFHLDNKSWRAAIHRYQSDKTRYAHYRQSDNILADSGWHCSFCFRRISDFIFKMKAYSHYDRVRFSHFLNPDRIQKVICEGADLFDMLPEEYTFREIIGKMGPIPRSYSAVHLPAFLLENAEKYKFLLPGNCMRER 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g01812 445 MobiDBLite consensus disorder prediction 1 26 - -
Trre9g01812 445 PANTHER BETA-1,4-MANNOSYL-GLYCOPROTEIN BETA-1,4-N-ACETYLGLUCOSAMINYL-TRANSFERASE 185 219 IPR006813 GO:0003830|GO:0006487|GO:0016020
Trre9g01812 445 MobiDBLite consensus disorder prediction 27 56 - -
Trre9g01812 445 Pfam FAR1 DNA-binding domain 100 170 IPR004330 -
Trre9g01812 445 MobiDBLite consensus disorder prediction 1 68 - -
Trre9g01812 445 Pfam Glycosyltransferase family 17 183 219 IPR006813 GO:0003830|GO:0006487|GO:0016020
Trre9g01812 445 Pfam Glycosyltransferase family 17 219 444 IPR006813 GO:0003830|GO:0006487|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g01812 Trre-Chr9 17075011 17081727 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g01812 186 444 Glycosyltransferase AT1G12990 75.874 1.67e-161 459
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Trre9g01812 Glyco_transf_17 1e-120 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g01812 K00737 - gmx:100787062 496.123