Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g01800 ATGACGGCAACAACAACAACAACAACAAATGCAGAAGAACAAGAAGCAGAACGTCTCAAATCAATAGCAGAATCAAAATACAAAACAACCAAAAACACAAAATCAGCTCTCAAATACGCCAAAAGAGCACAACGTTCAGCACCACACTTACAAGGAATCTCAGACTTAGTTACCTCTCTTAACATCCTATCCTCCCCTGATTTCTACGCCGTTCTCGACGTTGAACCCACCGCTACAATCACCACCATTCATAAACACTACAAAAAACTTTCTTCACTTCTTCACCCTAACAATAATCACCACCACGTTGCATCTTCTCAAGAAGCCCTTAAACTTGTTACTGACGCTTTCGGCATTTTATCTGATAGAAAGCTTAGAGAAGATTACGACGGTAAACTTGATTTTGAGATGAGAGAAAAGAGTTTTAAGGCTGTTGAAGCTGTTCAGAGTGATGGGTCTGAGGAAGATGAAGAAGAAGATAATACTTTGGGTGATTTTATGTTGAAGAGGAAGAATATGAAAAAGAAGAATGGAAAATTGGGTTGTGAAAAAAATGAGATTTTTAAGGGTAATGATGATGTGGGTGATGAAAAAGATGAGATTTTTAAGGGTAGTGATGAAGTGGGTGATGGAAAAGATGAGATTTTTAAGGGTAATGATGAAGTGGAAGTGGGTATTGCTGGGAGATTAAGGAAGAGAACGCGCTCGGTTGGGGAGGTTTTGGAATGTTCTGAATCCAAGAGGGTTGTTGGGAGTGAAGAGGAAACAATGACATTGGCTGAATTTCAATCTAAAGTGAAGACTAAGAAAAAGGATCAGAAAGGGAAGATGAAGGGGTTGGAGATTAAGAAGGGTTTTGTGGTTGAGGAGAAGAAGAATGAGGGTTCTGTGAAGAGAAATGGGTTGAGTCTTGAGAGGCATAGGGATACTAGTGGTGAGGAATTAGAAGTTATGGCGGTTGCGGATTCGGATTTTTATGATTTTGATAAAGATAGAGTGGAGAGGAGTTTTAAGAAAGGTCAAGTTTGGGCTGTGTATGATGACGATGATGGAATGCCGAGGAGTTATGCTTTGATTGATGAAACTGTTTCGGCAAATCCATTTAAAGTGATGATAAGTTGGTTGGATTTACAGAACAATGGCGATGGAATGACTGTTAGTAGGGAGAAATTAGGGTTTCATATACCTTGTGGGAGATTTAAAGTTGCTAAGAAGTCTTCCATAAGTTCTGTAAATGTGTTCTCTCATGTTGTGGATTGCGACCGGGCAGCGCATGAGGTTTACAAAGTTTATCCTAAGAAGGGCTCGGTTTGGGCGCTCTATAGTGAGGCAAGTTATGATGCCGGTGAGGGCAATAGATGCTATGATATTGTTGTGTTTTTGACAAGTTACAGCGAGATGAATGGTATGAGCATGGCATTTCTCGAGAAGGTTGATGGTTACAAGACGGTGTTTAAGAGACAAGAGAGTGGGAGTCACGCTGTTAGATTTCTTGGGAAGGATGAATTTGGGCTAATTTCTCATCAGATTCCTGCGAGAAAATTTCCTTGTGACGAGGCTCCTGAGTTGTTGAAAGACTGTTGGGAGCTTGATCCGGCTTCACTTCCTTCAGATTTACTTACTATTGGCGGCAGAGATAATTGA 1644 0.4057 MTATTTTTTNAEEQEAERLKSIAESKYKTTKNTKSALKYAKRAQRSAPHLQGISDLVTSLNILSSPDFYAVLDVEPTATITTIHKHYKKLSSLLHPNNNHHHVASSQEALKLVTDAFGILSDRKLREDYDGKLDFEMREKSFKAVEAVQSDGSEEDEEEDNTLGDFMLKRKNMKKKNGKLGCEKNEIFKGNDDVGDEKDEIFKGSDEVGDGKDEIFKGNDEVEVGIAGRLRKRTRSVGEVLECSESKRVVGSEEETMTLAEFQSKVKTKKKDQKGKMKGLEIKKGFVVEEKKNEGSVKRNGLSLERHRDTSGEELEVMAVADSDFYDFDKDRVERSFKKGQVWAVYDDDDGMPRSYALIDETVSANPFKVMISWLDLQNNGDGMTVSREKLGFHIPCGRFKVAKKSSISSVNVFSHVVDCDRAAHEVYKVYPKKGSVWALYSEASYDAGEGNRCYDIVVFLTSYSEMNGMSMAFLEKVDGYKTVFKRQESGSHAVRFLGKDEFGLISHQIPARKFPCDEAPELLKDCWELDPASLPSDLLTIGGRDN 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g01800 547 Gene3D DnaJ domain 59 152 IPR036869 -
Trre9g01800 547 PRINTS DnaJ domain signature 87 102 IPR001623 -
Trre9g01800 547 PRINTS DnaJ domain signature 69 87 IPR001623 -
Trre9g01800 547 PRINTS DnaJ domain signature 105 125 IPR001623 -
Trre9g01800 547 PANTHER BNAC03G44070D PROTEIN 11 536 - -
Trre9g01800 547 SMART dnaj_3 66 125 IPR001623 -
Trre9g01800 547 SUPERFAMILY Chaperone J-domain 59 132 IPR036869 -
Trre9g01800 547 CDD DnaJ 67 122 IPR001623 -
Trre9g01800 547 ProSiteProfiles dnaJ domain profile. 67 133 IPR001623 -
Trre9g01800 547 Pfam DnaJ domain 67 130 IPR001623 -
Trre9g01800 547 MobiDBLite consensus disorder prediction 1 25 - -
Trre9g01800 547 Pfam Domain of unknown function (DUF3444) 317 515 IPR024593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g01800 Trre-Chr9 16892229 16893971 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g01800 9 135 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 29.787 2.31e-11 63.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g01800 - - tpra:123909844 917.146