Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g01767 ATGCCTTACGAAGATAATCCGTATCGCGATGAGGACGGTGAACCATTGATGGATTACGACGATATACAATCCGATCGTGAGGCGTCACCGGAGCCACAACAGCTCGACGATTTCGAGGAAGATGTTGATGATTTTCCTTCTCGGGGTCGATCTCAGACTCCGGTTTATGACAATGATCCATCAAAATCGAAGCCGAGGAAAAGGCTGATTAAGAAAAGTGATACCGGGAAACAGTCCGTGGTGGCGCCACCGCCGGAGCTTGAGGATGAGTTGGAGGAGGATCGTTTCCAGGCTGATGAGGAGGAAGAAGGGAGGAAGAGGAAGAAAGGGAAGGATGCTGGATCAGGGAAAAAGGAGAAGAGGTTGAAAGGGGAAAAGAGGGTTGGAAGTAGCAGTGGTGGAAAGAGTGGGTCAAAATTTGGGGGTTCGAAGAAAGGGTTTGGTGGTAAAGGTGGGAGTGATCATGATGATGGTGAAGTTAAGGAAATGTGGGATACAATTGCTGGAGGAGATTCTGAGGATGATCACGAGGGTAACAGGAATATGGACGATGATAACTTTATAGATGACACTGGAGTGGAACCTGCCATGTATGGTTACGATGAACCACGTTCTCCTGGTGATGCTCCACAGGCAGAGGAAGGTGAGGAGGAGGATGAAATGAAGGATCTTTTCAAGATGGGTAAGAAAAAGAAGAAAAACGAAAGGAGTCCTGCGGAAATTGCTTTATTAGTTGAGAATGTCATGGCTGAGCTCGAGGTTACAGCAGAAGAGGATGCTGAACTTAATCGCAATAACAAGCCTGCTATTAATAAACTCAGAAAATTGCCTCTTCTTACTGAAGTCCTCTCAAAGAAACAGCTTCAACTAGAGTTCTTAGATCACGGAGTGCTAACTTTATTGAAGAATTGGCTTGAGCCACTTCCTGATGGAAGTCTGCCAAATATTAACATAAGGACAGCAATTTTGAAGATTTTGAATGATTTTCCTATAGACCTAGAGCAGTATGATAGAAGAGAACAGCTGAAGAAAAGTGGTCTTGGAAAGGTTATTATGTTCTTATCAAGGTCCGATGAAGAAATCAATGTAAATAGGAAATTAGCCAAGGAATTGGTTGATAAATGGAGCCGACCTATATTTAATAAGAGTACTCGGTTTGAAGACATGCGAAATAATGAGGATGATAGGGTTCCTTACAGAAGGCCATCAGTTAAAAAGCCAACAAATAAAGCTGCAGGGATGGCATCTAGAGATGGTGATCTTGATTTGGAATTTTCACAACAAGGGCCTAAGTCTGGACAGTCATCTGCCAGGCAACTTACATCAAGGCCAGAAGCAACACCTTTGGATTTTGTGATCCGCCCCCAATCTAAAATTGATCCTGATGAAATTAGAGCACGTGCAAAGCAATGTTCACAAGACCAGCATCGTATGAAGATGAATAAGAAATTGCAGCAGTTGAGGGCTCCAAAAAAGAAGCAGCTTCAGGCTACAAAGCTGAGCGTGGAAGGTCGTGGTATGGTCAAATACTTGTGA 1536 0.4375 MPYEDNPYRDEDGEPLMDYDDIQSDREASPEPQQLDDFEEDVDDFPSRGRSQTPVYDNDPSKSKPRKRLIKKSDTGKQSVVAPPPELEDELEEDRFQADEEEEGRKRKKGKDAGSGKKEKRLKGEKRVGSSSGGKSGSKFGGSKKGFGGKGGSDHDDGEVKEMWDTIAGGDSEDDHEGNRNMDDDNFIDDTGVEPAMYGYDEPRSPGDAPQAEEGEEEDEMKDLFKMGKKKKKNERSPAEIALLVENVMAELEVTAEEDAELNRNNKPAINKLRKLPLLTEVLSKKQLQLEFLDHGVLTLLKNWLEPLPDGSLPNINIRTAILKILNDFPIDLEQYDRREQLKKSGLGKVIMFLSRSDEEINVNRKLAKELVDKWSRPIFNKSTRFEDMRNNEDDRVPYRRPSVKKPTNKAAGMASRDGDLDLEFSQQGPKSGQSSARQLTSRPEATPLDFVIRPQSKIDPDEIRARAKQCSQDQHRMKMNKKLQQLRAPKKKQLQATKLSVEGRGMVKYL 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g01767 511 MobiDBLite consensus disorder prediction 149 187 - -
Trre9g01767 511 SUPERFAMILY Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 294 388 IPR035441 -
Trre9g01767 511 MobiDBLite consensus disorder prediction 427 443 - -
Trre9g01767 511 MobiDBLite consensus disorder prediction 391 460 - -
Trre9g01767 511 MobiDBLite consensus disorder prediction 1 33 - -
Trre9g01767 511 Gene3D Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 238 385 IPR035441 -
Trre9g01767 511 PANTHER PROTEIN IWS1 HOMOLOG 1 1 511 IPR044204 GO:0009742|GO:0032784
Trre9g01767 511 MobiDBLite consensus disorder prediction 99 128 - -
Trre9g01767 511 ProSiteProfiles TFIIS N-terminal domain profile. 299 382 IPR017923 -
Trre9g01767 511 MobiDBLite consensus disorder prediction 1 220 - -
Trre9g01767 511 Pfam TFIIS helical bundle-like domain 324 379 IPR017923 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g01767 Trre-Chr9 16441398 16445096 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR IWS1 Trre9g01767 Med26 5.5e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g01767 K17498 - gmx:100801805 774.622