Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g01738 ATGAAGTTGTCTGATACTCAATGGAACACAGAGCAAGTTGAAAAGATCCCTCCAAACGGTGTTGTTGTGGCTTCTGGATCTTATCCATACAATCCTTATGCCATGCCTAATCCAAACGGTGTTGCTGAGGCATCTCACATTATGCCTCCTTATGGTACTCCGCCACACCCTTATGTTGCAATGTATCCCCATGGTGGCATATATGCCCATCCATCCATGCCTCCGGGATCTTATCCATACAATCCTTATGCCATGCCTACTCCAAACACTCCTGCCAGCATGGAAAATGATGGTAAGCCTCCTGAGGTGAAGGAAAAATTGCCAATCAAAAGATCAAAAGGAAGTTTGGGTAGTTTGAACATGATTACAGGGAAAAATAATGAACATGGTAAAACAACGGGGACATCTGCTAATGGAATTCACTCAAAAAGTGGTAGTGGAAGTTTTGAAGGTACTAGTGAAGGAAGTGATGCAAATTCTCTTAATGACTCTCAGTTGAAATCCGGGGACAGGCGGGATTCTTATGAAGGTGAACCGTCTCAAAATGGCAGTTCAGCGCATACTTCACAAAATGGAGGACTTAATGCATCTCATACAGTAGTTAATCATAGTATGTCTGTCATTCCTATCTCTGCGAGTGGTGCTCCTGGAGCTGTTGCTGGTCCTGCAACAAACTTAAATATAGGAATGGATTATTTGGGCACGCCGACTTCATCCAACGTTCCTTCTATCCGTGGAAAGGTGCCATCTACTACAGTTGCGGGAGGGGTCGTTACTGGTGGATCACTGGATAGTGTCCAGTCACAACTTTGGCTACAGCACATTATGCCTCCTTATGGTACACCGCCACATCCCCATGTTGCAATGTATCCCCATGGTGGCATAAATGCCCATCCATCCATGCCTCTGGGATCTTATGCATACAATCCTTATGCCATGCCTACTCCAAACGGTGTTGCCGAGGCTTCTGCAATTGGAATTGTCAATAACCATAAAGGAAGAAGGCAAGGATTGGGATTGGGTAAAAATCCGATTCACAAAGTCAAGTTGAGGATCACTATTCGCACTTCAGGACTTTCAGCAGAAGATTCAACAATTGTTCAGAGACTAGTTATCTTACTTGGAAAATATATTTCCAAGTAA 1143 0.4392 MKLSDTQWNTEQVEKIPPNGVVVASGSYPYNPYAMPNPNGVAEASHIMPPYGTPPHPYVAMYPHGGIYAHPSMPPGSYPYNPYAMPTPNTPASMENDGKPPEVKEKLPIKRSKGSLGSLNMITGKNNEHGKTTGTSANGIHSKSGSGSFEGTSEGSDANSLNDSQLKSGDRRDSYEGEPSQNGSSAHTSQNGGLNASHTVVNHSMSVIPISASGAPGAVAGPATNLNIGMDYLGTPTSSNVPSIRGKVPSTTVAGGVVTGGSLDSVQSQLWLQHIMPPYGTPPHPHVAMYPHGGINAHPSMPLGSYAYNPYAMPTPNGVAEASAIGIVNNHKGRRQGLGLGKNPIHKVKLRITIRTSGLSAEDSTIVQRLVILLGKYISK 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g01738 380 MobiDBLite consensus disorder prediction 178 197 - -
Trre9g01738 380 MobiDBLite consensus disorder prediction 116 165 - -
Trre9g01738 380 PANTHER G-BOX-BINDING FACTOR 3-RELATED 273 338 IPR044827 GO:0003700|GO:0006355|GO:0043565
Trre9g01738 380 MobiDBLite consensus disorder prediction 89 197 - -
Trre9g01738 380 Pfam Disordered region downstream of MFMR 105 242 - -
Trre9g01738 380 Pfam G-box binding protein MFMR 42 74 IPR012900 -
Trre9g01738 380 Pfam G-box binding protein MFMR 271 302 IPR012900 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g01738 Trre-Chr9 15574915 15578351 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g01738 270 357 bZIP Transcription Factor Family AT2G35530 52.809 3.76e-20 89.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g01738 K09060 - gmx:100101882 370.933