Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g01732 ATGTTTATGCAGTTCCTTCCTTGGTGTGGCTTTGGTGAATCCGCGTTTGCTCATGTATTTTCTGATTTGATCTTAGTCGACAATGCTGGGAATCAATATATGTGTGTTTTGAAGATTGATGTGGACTCTAGCGGAGAATTGGCTTTTAATCTTTCTGGTGGTTGGACTGATTTCTGCACAGCTCATGGCCTCCTTGAGGGTGATAGGGTGAAGTTTAGTGTTGCTCAGTACATTGCCAGCAATGTCATGTATGCATCTGTTTATCCAAGGGTTAGGGTGGAGGAGTATTTGAAAAGTAGTAATGGGGAAGAGTATGATTGTTACATGTAA 330 0.4152 MFMQFLPWCGFGESAFAHVFSDLILVDNAGNQYMCVLKIDVDSSGELAFNLSGGWTDFCTAHGLLEGDRVKFSVAQYIASNVMYASVYPRVRVEEYLKSSNGEEYDCYM 109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g01732 109 SUPERFAMILY DNA-binding pseudobarrel domain 22 75 IPR015300 -
Trre9g01732 109 Pfam B3 DNA binding domain 22 76 IPR003340 GO:0003677
Trre9g01732 109 ProSiteProfiles B3 DNA-binding domain profile. 1 91 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g01732 Trre-Chr9 15487451 15487780 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Trre9g01732 B3 1.7e-07 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g01732 - K12035 tpra:123889462 99.3673