Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g01723 ATGAGATCTGAAAGAAATGTAACCAAATCTGAACAAAAACAGGTTTTTAGAAATGCTGTTGAAATCCTATATGAATTTCGTTCTGTGCTACCGGACAGGTTAATATTTAAAGACAATTTCTATGTAGCTGCTGTCTCCAAAGAAAAATTAATGGCTACTCTGATTTTTAAACTCCATCCTACAGCTACTACTGTTTATGCTGAAATACCTCTAGCAGCCACTCACCCACTTCCTCGGCGTAAGGGGGCGTTAAGAGCAATCATGGTGCAACCTGAGAAAGTCCTAAAGAAGTTGAAAGTAAACAAAATCATTCTACCTTCTCTTCCTCGCACTCTATATATATGGGTCCAAAAATTTGGATTCGCTACAGTTCCTTTGTGGGAGTTGAACACTTTTATGGAAGAACATAGGAGCATTGAAGATTTTCAAGGAACTATTCTTTGCTATAAAGTTCTTTTCTAG 462 0.3723 MRSERNVTKSEQKQVFRNAVEILYEFRSVLPDRLIFKDNFYVAAVSKEKLMATLIFKLHPTATTVYAEIPLAATHPLPRRKGALRAIMVQPEKVLKKLKVNKIILPSLPRTLYIWVQKFGFATVPLWELNTFMEEHRSIEDFQGTILCYKVLF 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g01723 153 PANTHER PHD FINGER PROTEIN 12 64 152 IPR042163 GO:0003714|GO:0045892
Trre9g01723 153 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 33 129 IPR016181 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g01723 Trre-Chr9 15435158 15435619 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g01723 22 153 PHD Transcription Factor Family AT3G14980 32.331 2.22e-11 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g01723 - - ghi:121212336 67.3958