Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g01717 ATGGCAGATAGTCCAATATCATTTTTATTGGATAGGTTGACTTGGTTACTTCAAGAGGAAGTAAATCTACAAAGAGGCGTTCGTGAAGATGTTCGATACATCAAAGACGAACTCGAACGCCACAAAGCTATATTAATGGTAGCTGATTCATTGGAAGACAAAGATCCTGAACTCAAAGTATGGGTTAAAAGGGTAAGAGATATTGCTCATGACATGGAAGATGCTATAGATGAATACAATCTCCGCCTTGTGTATCATCAACAAGGTAACAATTCTTCTTTTCATAAGATTGTTTTTGGCATCAAGACAATGAAAGCTAGGCACAAAATAGCTTCAAATATACAAGGAATCAAATCCAAAGTTGAAGTTATTTCGCAAAGAAATCCGATCATATCTGATGTAGCTTCAATCTCAAGTCAAAGGCGGCTTGATAGTCAAGGTAATGCCCTTTTGCTAGAGGAAGCTGATTTAGTTGGAATTGAACAACCAAAGAAGCAGTTAAGTGATTTGCTTTTCAAAGATGAATCAAATAGAGCTGTGATTTCAATCTATGGTATGGGAGGTTTAGGGAAAACAACATTAGCAAAACAAGTCTATGATGATCCAAAAGTCAAAAAACATTTCAGGATTCATGCTTGGGTTAATCTCTCACAATATTTTAAAATGGAAGAGCTATTGAAATACCTTGTTCAACAACTTTATAGTGTTATTGGTAAACCAGTTCCAGAAGCTATTGGAATGATGAACAGTGACAAGGTAAAAGAGTTGATCAAGAATTTGCTTCTGAGAAGTAGGTACCTCATTGTGCTTGATGATGTGTGGCAGGTGAATGTATGGGATGTTGTGAAGCTTGCTTTGCCTAATAACAACCGCGGAAGTAGAGTGATTCTTACAACGCGCAAGAGAGATATAGCTTTGTATTCTCGTGCTGAATTAGGTAAGGATTTTCCCCTTCAATTCTTACCTGAGCAAGAAGCTTGGTCACTTTTTTGTAGGAAGACATTTCAAGGTAACTCATGTCCTCCTCATCTTGAAGAAGTTTGTCGGAAGATCTTAAAATTGTGTGGAGGGTTGCCATTGGCAATTGTGGCAATCAGTGGTGCTTTGGCTACAAGAGAAAGATCAAACATAGAAGAGTGGCAAATAGTCTGCAGAAGTTTTGGATCAGAAATTAAAGGCAATGACAAATTAGAGGATATGAAGAAAGTACTTTCCTTAAGTTTCAATGAGTTACCTTACTACCTTAAATCATGTCTGTTGTATTTAAGCGTCTTCCCCGAATTTCATGCTATCGAGCATATGAGATTGATTCGATTGTGGATAGCAGAAGGGTTTGTAAATGGTGAAGATGGTAAGACACTGGAGGAAGTTGCAGATAGTTACCTTAAGGAGCTTTTGAACAGAAGTTTTCTCCAAGTGGTAGAAAAAACTAGTGATGGAAGAATGAAGACTTGTCGCATGCATGACCTTCTAAGAGAAATTGTCAATTATAAGTCAAGAGATCAAAACTTTGCAACAATAGCCAAAGAACAAGATATGGAATGGACGGAACAAGTTCGTCGTTTATCGGTCATATATTCATTGCATAATGTACTTAAACAGAATAAGACCATATTCAAACTTAGGTCTCTGCTAATGTTTGCATTATCAGATCCACTAAATCATTTTTCTATCCATGATTTATGTTCCTCCACAGGTGTTAAGTTGCTCAGGGTGTTAGATTTGCAGGATGCACCTTTGGAGGCTTTTCCTACTGAAATTGTCAAACTTTACCTTCTGAAGTATCTAAGTTTGAAGAATACAAAGGTGAAAAGCATTCCAAGTTCCATTAAGAAGCTGCAGAACCTAGAGACATTGGATCTTAAACACACTTATGTCACTGAATTGCCTGTTGAAATTGTCGAGCTGAAACGATTACGCCATCTTCTGGTGTATCGTTACGAGATTGAATCCTATGCCCATTTCCATGCAAAGCATGGATTCAAAGTGGCTGCACCTATAGGAAACATGCAATCATTGCAAAAGCTTTGTTTTATAGAGGTGGATCAAGGAAGTGGAGCATTGATGGTTGAGTTAGGAAAACTTACTCAGCTTAGGAGGCTAGGCATTAGAAAAATGAGGAAAGAAGATGGTGCTGCTTTGTGTTCATCTATTGAGAAAATGATCCATCTTAGATCACTTTCCATAACTGCGATAAAAGAAGATGAGATAATCGATATTCACGATATTTCAAAGCCACCTCAATGTCTTCAACAGTTATACTTGAGTGGATGTTTAGAGAAGTTTCCACAATGGATAAAATCTTGCAATAATTTAGTCAAAGTTTTCTTGAAATGGAGCAGGTTAAAGGAAGATCCACTGATGTATCTTCAAGGTTTGCCAAATCTTCGACATCTTGAGTTTCTTCAAGTTTATGTTGGCGAGACATTGCATTTCAATACAAAAGGGTTTCCAAGTCTAAAGGTATTAGGCCTCGATGATTTACAAGGACTAAAATCTATGATAATTGAGGAAGGAGCAATGCAAGGTCTAAAAAAGTTGATCATTCAACGTTGCGGTTCGTTCAAGCATGTACCATTAGGCCTTGAACACCTAACAAAGCTAAAAACAATTGAGTTCTTTGATATGCCTGATGAATTGGTTATGGCATTGCTTCCAAATGGAGGCAAAGATTATTGGAGAGTACAAAATGTTCCAACAGTTTATTCAACTTATTGGAGGGAAGGTGGTTGGGATGTTTATTCATTAGAGACTTTTGGGGAGAGAGAGACTGATGTCAATCATAGTAGTGCTAAGAGGACTCTTGAGCTTCCTACTCTTTGGAAGGTTTAA 2832 0.3743 MADSPISFLLDRLTWLLQEEVNLQRGVREDVRYIKDELERHKAILMVADSLEDKDPELKVWVKRVRDIAHDMEDAIDEYNLRLVYHQQGNNSSFHKIVFGIKTMKARHKIASNIQGIKSKVEVISQRNPIISDVASISSQRRLDSQGNALLLEEADLVGIEQPKKQLSDLLFKDESNRAVISIYGMGGLGKTTLAKQVYDDPKVKKHFRIHAWVNLSQYFKMEELLKYLVQQLYSVIGKPVPEAIGMMNSDKVKELIKNLLLRSRYLIVLDDVWQVNVWDVVKLALPNNNRGSRVILTTRKRDIALYSRAELGKDFPLQFLPEQEAWSLFCRKTFQGNSCPPHLEEVCRKILKLCGGLPLAIVAISGALATRERSNIEEWQIVCRSFGSEIKGNDKLEDMKKVLSLSFNELPYYLKSCLLYLSVFPEFHAIEHMRLIRLWIAEGFVNGEDGKTLEEVADSYLKELLNRSFLQVVEKTSDGRMKTCRMHDLLREIVNYKSRDQNFATIAKEQDMEWTEQVRRLSVIYSLHNVLKQNKTIFKLRSLLMFALSDPLNHFSIHDLCSSTGVKLLRVLDLQDAPLEAFPTEIVKLYLLKYLSLKNTKVKSIPSSIKKLQNLETLDLKHTYVTELPVEIVELKRLRHLLVYRYEIESYAHFHAKHGFKVAAPIGNMQSLQKLCFIEVDQGSGALMVELGKLTQLRRLGIRKMRKEDGAALCSSIEKMIHLRSLSITAIKEDEIIDIHDISKPPQCLQQLYLSGCLEKFPQWIKSCNNLVKVFLKWSRLKEDPLMYLQGLPNLRHLEFLQVYVGETLHFNTKGFPSLKVLGLDDLQGLKSMIIEEGAMQGLKKLIIQRCGSFKHVPLGLEHLTKLKTIEFFDMPDELVMALLPNGGKDYWRVQNVPTVYSTYWREGGWDVYSLETFGERETDVNHSSAKRTLELPTLWKV 943
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g01717 943 PANTHER DISEASE RESISTANCE PROTEIN RP 33 855 IPR044974 GO:0006952
Trre9g01717 943 FunFam Probable disease resistance protein At1g63360 408 497 - -
Trre9g01717 943 PRINTS Disease resistance protein signature 180 195 - -
Trre9g01717 943 PRINTS Disease resistance protein signature 355 369 - -
Trre9g01717 943 PRINTS Disease resistance protein signature 260 274 - -
Trre9g01717 943 PRINTS Disease resistance protein signature 611 627 - -
Trre9g01717 943 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 152 422 IPR027417 -
Trre9g01717 943 Pfam Rx N-terminal domain 6 93 IPR041118 -
Trre9g01717 943 Pfam NB-ARC domain 161 409 IPR002182 GO:0043531
Trre9g01717 943 FunFam Probable disease resistance protein At1g61300 142 312 - -
Trre9g01717 943 Gene3D Ribonuclease Inhibitor 527 882 IPR032675 -
Trre9g01717 943 SUPERFAMILY L domain-like 486 879 - -
Trre9g01717 943 Gene3D - 408 498 IPR036388 -
Trre9g01717 943 Gene3D - 320 407 IPR042197 -
Trre9g01717 943 CDD RX-CC_like 2 125 IPR038005 -
Trre9g01717 943 Gene3D - 5 111 - -
Trre9g01717 943 Gene3D - 136 311 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g01717 Trre-Chr9 15352717 15355757 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g01717 158 374 WRKY Transcription Factor Family AT5G45050 24.885 9.52e-09 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g01717 K13457 - gmx:100305458 1454.88