Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g01710 ATGCAGAGAATTTCTGAAATTGATTTAAACGTGTGCGCTTCAATTCAAGAACCCTCTGAGAATAACAGCATGGAAGATCAACAACAACAGCAACAGCAACAGAATCTTGACACTGATATGATTGAGTCTGGTAGTGACGCCACCGTGATTATAAACTCTAATGAAAATAATCGCTTAATTCAAGTTGAGTTACTACCAGAAGAAAATCAGTCTGTTGCAAATAGAGAGCGTAGAGAAAGAGTACATTGGTCAGAAGAAGAACATAGGTTGTTTCTGCAAGGACTGAACAAACATGGTAAGGGACGTTGGAAAGACATTTCAAAAGATTTTGTGCCGACAAGAACTCCAGCTCAAATTGCTAGTCATGCTCAAAAATACTTTAAACATCAAAAAGAAGCCGCGGGAAAACGGACGAATAGGAGAACAAGTATCCATGACATAACCGTCGACAACAATGTTACAATAGCCAGTCTCCCTACTGCACAACAAATTGAGATTCCTTCAATTGAACAACAAAATGAAATTCCTCAATTGACCATTCCCTCTATTGAACAAAAACAGCTTGAGATTCCTTCAATTGAACAGCAAAATAAGATTTCTCCTTTGGTTACTCTTCCTAATGAACAACAAAATGAGAATATTTCTCCTTTGGTCACTGTTCCTAATGAACAACAAAATGAGAATATTTCTCCTCACAGCACAACCTTAAATGACAACAAAAGTGGCAACTTGGTCACTCCTTCCATTCAGCCATTTCAAGAAGTGCAGGGAGTAAAACTTGCGTACAAAATTGATTTTGAAATTACGCCTGAGAATATGAAGAATGTCCTTAAGGTGTGTGAGTTGTTGGAAAAGAACTTGAATAGTTGA 870 0.3747 MQRISEIDLNVCASIQEPSENNSMEDQQQQQQQQNLDTDMIESGSDATVIINSNENNRLIQVELLPEENQSVANRERRERVHWSEEEHRLFLQGLNKHGKGRWKDISKDFVPTRTPAQIASHAQKYFKHQKEAAGKRTNRRTSIHDITVDNNVTIASLPTAQQIEIPSIEQQNEIPQLTIPSIEQKQLEIPSIEQQNKISPLVTLPNEQQNENISPLVTVPNEQQNENISPHSTTLNDNKSGNLVTPSIQPFQEVQGVKLAYKIDFEITPENMKNVLKVCELLEKNLNS 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g01710 289 CDD SANT 83 127 IPR001005 -
Trre9g01710 289 ProSiteProfiles Myb-like domain profile. 75 127 IPR001005 -
Trre9g01710 289 ProSiteProfiles SANT domain profile. 83 131 IPR017884 -
Trre9g01710 289 FunFam transcription factor MYB1R1 81 132 - -
Trre9g01710 289 MobiDBLite consensus disorder prediction 16 36 - -
Trre9g01710 289 PANTHER TRANSCRIPTION FACTOR KUA1 27 234 - -
Trre9g01710 289 Pfam Myb-like DNA-binding domain 80 127 IPR001005 -
Trre9g01710 289 SUPERFAMILY Homeodomain-like 77 132 IPR009057 -
Trre9g01710 289 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 75 131 IPR017930 -
Trre9g01710 289 MobiDBLite consensus disorder prediction 224 243 - -
Trre9g01710 289 SMART sant 79 129 IPR001005 -
Trre9g01710 289 Gene3D - 82 132 - -
Trre9g01710 289 NCBIfam myb-like DNA-binding domain, SHAQKYF class 79 130 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g01710 Trre-Chr9 15285298 15287380 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Trre9g01710 Myb_DNA-binding 6.1e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g01710 - - tpra:123907621 298.13