Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Trre9g01708 | ATGGATCGATTATCCAAAATTAATTTAAATGAGCGGGCTTCAATTCAAACCCCCTCTGAGAATAGCATTGAACAACCACGACAAAATCTCGACACTGATATGATTGAGTCGGATAATGGGATCGTGATTGTAAACTCTAATGAAAGAGTTAGAATAATTGAGCTCAAGTCAATACCCGAAGAAACTCAGGCCGCGGCAAATAGAATAATTGAACTCGAGTCAATACCCGAAGAAACTCAGGCCGCGGCAAATAGAGCGCATAGAAAAAGGAAACATTGGAAAGAAGATGAACATAGGCAATTTTTGAAAGGGCTGAAAAAATATCAAAGGGGACAATGGAAAGAGATTTCAGAAGAATTTGTGACAACAAGAACTCCAAGTCAAATTGCTAGCCATGCTCAAAAGTATTACGAGCGCCAAGATACGGCGCAAAAAGAGCAAAAGAAGAGAAGAAGTATTCATGACACAACCATCGACAAAAATGGTAGATTAGTCACTCTTCCTATTAAAAAACAAAATGAGATTCCTATTGCACAAGAAATTGATGAAATTCCTTCAATTGAACAACAAAATAATACTTCTTCTTTGGTCACTCAGCCTATTGATGAACAAAATGAGATTCCTTTAAATGATAGCAACAATGGCGACTTGGTCACTCCACCTATTGAGCCATTGCAAGAACATCCACAACTTGAGTGCACAATTCGTACGCGCGATATTTTGCCGCATGATATGAATAATGTCATCAAGATGTTTGAATTGCTGGAAAAAACCTTAAAAAGATGA | 786 | 0.3766 | MDRLSKINLNERASIQTPSENSIEQPRQNLDTDMIESDNGIVIVNSNERVRIIELKSIPEETQAAANRIIELESIPEETQAAANRAHRKRKHWKEDEHRQFLKGLKKYQRGQWKEISEEFVTTRTPSQIASHAQKYYERQDTAQKEQKKRRSIHDTTIDKNGRLVTLPIKKQNEIPIAQEIDEIPSIEQQNNTSSLVTQPIDEQNEIPLNDSNNGDLVTPPIEPLQEHPQLECTIRTRDILPHDMNNVIKMFELLEKTLKR | 261 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Trre9g01708 | 261 | SUPERFAMILY | Homeodomain-like | 87 | 141 | IPR009057 | - | |
Trre9g01708 | 261 | Pfam | Myb-like DNA-binding domain | 90 | 136 | IPR001005 | - | |
Trre9g01708 | 261 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 85 | 141 | IPR017930 | - | |
Trre9g01708 | 261 | MobiDBLite | consensus disorder prediction | 124 | 156 | - | - | |
Trre9g01708 | 261 | SMART | sant | 89 | 139 | IPR001005 | - | |
Trre9g01708 | 261 | PANTHER | TRANSCRIPTION FACTOR KUA1 | 55 | 213 | - | - | |
Trre9g01708 | 261 | ProSiteProfiles | SANT domain profile. | 93 | 141 | IPR017884 | - | |
Trre9g01708 | 261 | MobiDBLite | consensus disorder prediction | 205 | 219 | - | - | |
Trre9g01708 | 261 | Gene3D | - | 91 | 143 | - | - | |
Trre9g01708 | 261 | ProSiteProfiles | Myb-like domain profile. | 85 | 137 | IPR001005 | - | |
Trre9g01708 | 261 | MobiDBLite | consensus disorder prediction | 1 | 26 | - | - | |
Trre9g01708 | 261 | MobiDBLite | consensus disorder prediction | 9 | 26 | - | - | |
Trre9g01708 | 261 | MobiDBLite | consensus disorder prediction | 138 | 156 | - | - | |
Trre9g01708 | 261 | CDD | SANT | 93 | 136 | IPR001005 | - | |
Trre9g01708 | 261 | NCBIfam | myb-like DNA-binding domain, SHAQKYF class | 89 | 140 | IPR006447 | GO:0003677 | |
Trre9g01708 | 261 | MobiDBLite | consensus disorder prediction | 205 | 225 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Trre9g01708 | Trre-Chr9 | 15277176 | 15280922 | Wgd |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | MYB-related | Trre9g01708 | Myb_DNA-binding | 1.3e-10 | CL0123 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Trre9g01708 | - | - | tpra:123904276 | 262.307 |